Gene Rpic12D_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1041 
Symbol 
ID8018676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1092563 
End bp1093348 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content62% 
IMG OID644829816 
ProductIstB domain protein ATP-binding protein 
Protein accessionYP_002981006 
Protein GI241662646 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.614106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.144827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCATG AAGTCATGTT GGAGATGCTG AAGTCCTTGA AGCTGCACGG CATGGCGCAA 
GCACTGGGAG ACCTGGCGGC GCAGGACTCG CCGGCCTACC AGTCGGCCGT GGCTATCCTG
TCGCGTCTGC TCAAGGCCGA ACTCACCGAG CGCGAGGTGC GCTCGCTGGC CTATCAGATG
AAGGTGGCGC GCTTCCCAGC CTATCGAGAC CTGACCGGCT TCGACTTCAG TTGCAGCGAG
GCCAACGAGG CACTGGTGCG GCAGCTTCAC CGCTGCGAGT TCCTCGAGTC GGCGCACAAC
ATCGTGCTGG TCGGCGGCCC AGGTACGGGC AAGACCCATC TCGGCACCGC CATCGGCGTG
CAAGCCGTGG AGCACCATCA CCGCCGGGTG CGCTTCTTCT CGACCGTGGA GCTCGTCAAC
GCGTTGGAAC TGGAGAAGGT CTCAGGCAAG CCGGGACACC TGGCCACGCG ACTCATGTAT
GCCGACCTGG TGATCCTCGA TGAGCTGGGC TATCTGCCGT TCAGCCAGAC CGGCGGCGCA
TTGCTGTTCC ACCTGATCAG CAAGCTCTAC GAGCGCACCA GCCTCGTCAT CACCACCAAC
CTGAGCTTCG GCGAATGGTC CAGCGTCTTC GGGGATGCCA AGATGACCAC CGCGCTATTG
GATCGCCTCA CGCACCACTG CCACATTGTT GAAACCGGCA ACGATAGCTA TCGTTTCAAG
CACAGCACCA CCCAGCCCAA GAAGGAGAAA CGCACCGCCA AACAACCCGC ACAAAGCGAC
ACCTAA
 
Protein sequence
MQHEVMLEML KSLKLHGMAQ ALGDLAAQDS PAYQSAVAIL SRLLKAELTE REVRSLAYQM 
KVARFPAYRD LTGFDFSCSE ANEALVRQLH RCEFLESAHN IVLVGGPGTG KTHLGTAIGV
QAVEHHHRRV RFFSTVELVN ALELEKVSGK PGHLATRLMY ADLVILDELG YLPFSQTGGA
LLFHLISKLY ERTSLVITTN LSFGEWSSVF GDAKMTTALL DRLTHHCHIV ETGNDSYRFK
HSTTQPKKEK RTAKQPAQSD T