| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0987 |
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| Symbol | |
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| ID | 8018619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1037565 |
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| End bp | 1038674 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644829766 |
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| Product | putative sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_002980959 |
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| Protein GI | 241662599 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0805418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCAT CCATGTCGAA GGTGTGGCAC CCCGTTGCCG GGGCAGGCGC CCGCAAGCTG
CAGGCCGTTC GTCGGTCGGT TTTTCTTCTT CTGTGTGTTT CGGCGCTGGC GACTGCTGCG
CAGCCGCAGC CCGATCCCAT GCCGCGCAAG GAGGCCGCCT CCTGGCTCGC CAAAATCCAT
CGCGCGGCGC TCAAGCAGAA CTATGTCGGC ACGCTGACGT ATCAGCGTGG CACCGGCATG
CACTCCACCC GCATCCAGCA TTACTCCGAT CTCTTCAATA ATGAGTACGA GCGCGTCGAA
GCGCTGGACG GCAAGCAGCG CGAAATGCTG CGCCAGAATG ACGTCGTCCG GAACCTGATT
TACGACGTCA AACTCGTTGT GACGGAGAAG CAGGAGCACA AGGACAGCTT CCCCGCGCTG
CTCGCCACCA CCAATGGCGA TGTGCTCGAT CAATACGACA TGCGCCATCT ACCGACGGAG
CGAGTCGCGG GCATGGATTG CGAAGTCTTC CAGCTCGATC CGAAGGACGG CTACCGCTAT
GCCTACCGTA TCTGGGCGGA GCGTAACAGT GGTTTGCTCA TGCGTGCCCA GACCATCGGT
GAAGACGGCA AGGTGCTTGA ACAGGTTGCC TTCTCGCAAG TCGAACTGGG TGTGCCGTCG
GAAAAGCAGA AAATCGTTTC TGCGTTCAAG AACCTGAACG GCTGGAATCA GTACGAGATC
GTGACGCAGC CGACCAATCT GGCCGAGCAA GGCTGGACGA TCGGCAACCC CGTCAAGGGC
TTCCAGAAGA TCCGCGAGGT GCGCCGTCCG CTGGGCGACG TTGCGCCGGC CGGCAAGAAC
GCTTCCGGTT TCGAGGTCCA GCAGGTCGTG TTCAGTGACG GGCTCGCAGG ACTGTCGCTC
TTCATTGAGC CGGTGTCGGA AAAACGCACG CGTCGCGAGG GCTTTATCTC GCAAGGGGCC
ACGCATGTGA TGGTGCGACG TGTTGCCGAT TTCTGGCTGA CCGTGGTAGG CGAAGTCCCG
TTTGCTACCA TCAAGCAGTT TGGCGCAGCA GTCGACTACA AGCCGGTGTC CGCCAACGCG
ACCAACAAGC CTGTCGGCGC GCCACAGTAG
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| Protein sequence | MRASMSKVWH PVAGAGARKL QAVRRSVFLL LCVSALATAA QPQPDPMPRK EAASWLAKIH
RAALKQNYVG TLTYQRGTGM HSTRIQHYSD LFNNEYERVE ALDGKQREML RQNDVVRNLI
YDVKLVVTEK QEHKDSFPAL LATTNGDVLD QYDMRHLPTE RVAGMDCEVF QLDPKDGYRY
AYRIWAERNS GLLMRAQTIG EDGKVLEQVA FSQVELGVPS EKQKIVSAFK NLNGWNQYEI
VTQPTNLAEQ GWTIGNPVKG FQKIREVRRP LGDVAPAGKN ASGFEVQQVV FSDGLAGLSL
FIEPVSEKRT RREGFISQGA THVMVRRVAD FWLTVVGEVP FATIKQFGAA VDYKPVSANA
TNKPVGAPQ
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