| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0974 |
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| Symbol | |
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| ID | 8018606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1026390 |
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| End bp | 1027484 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644829753 |
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| Product | peptidase S49 |
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| Protein accession | YP_002980946 |
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| Protein GI | 241662586 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0652949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACT CGATTCCGCC GAAAGGGCCC GACGACGCCC CCAACGAGGG TGCAGGCAAA
CCAGAAGCGC TGGAAGTCGC ACAGCATGCG GATCATCCGC TTGAAGCCGA ATTGCGTAAC
CCGCCCCCAT CGGCATCGGC AGCCTCTGCG CCGGCCGGCG GCTGGGAGCG TGAGGTACTC
GAAAAAGTCC TGATGGCAAC GGTCCGTGAG CAGCGCGCCG CGCGCCGCTG GCGCATCTTT
TTCCGCTTCG TGGCGCTGGG CCTGATCGGA GTGCTTATTT ATGCGTTCGC CAGCTTGGAG
GGCGAAACCG TCAGCACGGG CCGCCACACA GCGATTGTCA CGCTCGAGGG TGAAATTGCG
GCCAACACAA ACGCCAGCGC CGAAAACATC AACGCATCCT TGCAGGCCGC GTTTGCAGAT
GACAACACCG TCGGTGTGAT CCTGAAGATC AATTCGCCGG GCGGCTCGCC GGTGCAGGCG
GGCATGATCA ACGATGAAAT CCGCCGTCTT CGCGCCAAGT ACAAGAAGAT TCCGCTATAC
GTCGTTGTAG AAGAAATGTG TGCGTCAGGC GGTTACTACG TGGCTGCCGC TGCTGACAAG
ATTTACGTCG ACAAGGCCAG CATCGTCGGT TCGATCGGCG TGCTGATGGA CGGCTTCGGC
TTTACTGGTC TGATGGACAA AGTGGGCGTG GAGCGCCGCC TGCTCACCGC CGGTTCGAAC
AAGGGAATGC TCGATCCGTT TTCGCCCGTG TCTCCGCAAC AGAAGCAATA CGCGCAAGAG
ATGCTGGACC AGGTGCACCA GCAGTTCATC GACGTGGTTA AGCAGGGGCG CGGCAACCGA
CTGAAGGATG ATCCCACGCT ATTCACCGGC CTGTTCTGGA CGGGCGCCAA GGCCGTCGAT
CTGGGTTTGG CCGACGCGAT CGGTAGCTCG GATTTCGTCG CTCGCAGCGT CATCAAGGCG
CCGGACGTGG TGGACTACAC CGTCAAGGAA AACTTCGCCT CGCGCGTGGC GCGCAAGCTC
GGCACGGCGA TGGGAGCGGG CGCAGTCAAG GCGCTGGCCA CTACGGGCCA GCTCAAGCTG
CTGATGAAGG AGTAG
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| Protein sequence | MTDSIPPKGP DDAPNEGAGK PEALEVAQHA DHPLEAELRN PPPSASAASA PAGGWEREVL
EKVLMATVRE QRAARRWRIF FRFVALGLIG VLIYAFASLE GETVSTGRHT AIVTLEGEIA
ANTNASAENI NASLQAAFAD DNTVGVILKI NSPGGSPVQA GMINDEIRRL RAKYKKIPLY
VVVEEMCASG GYYVAAAADK IYVDKASIVG SIGVLMDGFG FTGLMDKVGV ERRLLTAGSN
KGMLDPFSPV SPQQKQYAQE MLDQVHQQFI DVVKQGRGNR LKDDPTLFTG LFWTGAKAVD
LGLADAIGSS DFVARSVIKA PDVVDYTVKE NFASRVARKL GTAMGAGAVK ALATTGQLKL
LMKE
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