Gene Rpic12D_0954 details

Gene Information

• Locus tag: Rpic12D_0954
• Symbol: hscA
• ID: 8018586
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12D
• Kingdom: Bacteria
• Replicon accession: NC_012856
• Strand: +
• Start bp: 1003512
• End bp: 1005377
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644829733
• Product: chaperone protein HscA
• Protein accession: YP_002980926
• Protein GI: 241662566
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.0282439
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTTTAC TGCAGATTTC CGAACCTGGC GAATCACCCG CACCGCACCA GCGCCGTCTG 
GCGGTCGGCA TCGACCTGGG CACGACCAAC TCGCTGGTGG CCTCCGTGCG CAGCAGCGTG 
CCGGAAGTGC TGCCTGACGA TCAGGGGCGC CCGCTGTTGC CCTCTGTGGT GCGCTATCTG 
CCCACGGGCG GCGCCCACAT CGGCTACAAG GCCCAGGCCG AAGCCGTGCG CGACCCGAAG 
AACACCATCA TCTCGGTCAA GCGTTTCATG GGGCGCGGCC TCAAGGATGT TGCTCACATC 
GAGAACACGC CGTACGACTT TGTCGACGCG CCCGGCATGG TCCAACTGAA GACCGTGGCC 
GGCGTGAAGA GTCCGGTGGA AGTGTCGGCC GAGATTCTCG CCACGCTGCG CCAGCGCGCG 
GAAGATACGC TCGGCGATGA ACTCGTCGGC GCCGTCATCA CTGTCCCTGC GTACTTTGAC 
GACGCACAGC GGCAAGCCAC CAAGGACGCC GCCAAGCTGG CGGGCCTGAA CGTGCTGCGC 
CTGCTGAATG AACCGACCGC AGCCGCCATC GCCTACGGCC TGGACAACGC CGCCGAAGGC 
ATTTACGCCG TCTATGACCT GGGCGGCGGT ACGTTCGACA TCTCGGTGCT CAAGCTCACC 
AAGGGCGTGT TCGAGGTGAT GTCGACGGGC GGTGACTCCG CCCTTGGTGG GGACGATTTC 
GACCAGCGTA TCGTCTGCTG GATCGTCGAG CAGGCCGGCC TGCAACCGCT CTCTGCCGAA 
GACACGCGCC TGCTGCTGAA CAAGGCCCGC GCCGCCAAGG AATGGCTTTC CACCGCCGAC 
AGCACCGAGA TTGACGCGAT GCTCTCCACC GGCGAGACCG TGCATCTCGT GCTGACCGCT 
GAGACCTTTG CCGAACTGAC CGCCACTCTC GTGCAGAAGA CGCTGTCGCC CGTGCGCCGT 
GCGCTGCGCG ATGCAGGCGT GACGGTGGAA GACGTAAAGG GCGTGGTGCT CGTAGGCGGC 
GCGACGCGCA TGCCGATCAT CCGCCGTGCC GTGGGTCAGC TGTTCGGTCA GACGCCGCTC 
ACGAACCTCG ATCCGGATCA GGTGGTCGCC ATTGGTGCGG CCATGCAGGC CAACCTGCTG 
GCCGGCAACC GTGCGCCGGG TGAAGACTGG CTGCTGCTCG ACGTGATCCC GCTGTCGCTG 
GGCGTCGAGA CGATGGGTGG CCTGGTCGAG AAGATCATCC CGCGGAACAG CACGATTCCC 
GTTGCGCGCG CGCAGGAGTT CACCACGTTC AAGGACGGCC AGACGGCCAT GGCGATCCAC 
GTGCTGCAGG GCGAGCGCGA GCTGGCGAGC GATTGCCGTT CGCTGGCGCG TTTCGAGTTG 
CGTGGCATCC CGCCGATGGT GGCCGGCGCC GCACGCATCC GCGTGACGTA TCAGGTGGAC 
GCTGACGGTT TGCTGTCGGT GTCAGCACGC GAAACGGTGT CGGGCGTGGA AGCGTCGATC 
ACTGTAAAGC CGTCGTACGG CCTGGCTGAT GACGATGTCG CGCGTATGCT GCAGGAAGGT 
TTCCAGTCCG CCGAAGACGA CATGCGCCGT CGAGCGCTGG CGGAGGAGCG TGTTGAGGCC 
GAGCGCCTGC TTGAGGCGCT GTCGCAGGCC CTGGCGGCCG ATGGCGATCT GCTGTCGCCC 
GAAGAGCGCG CCGCCATCGA CGCCGAGATC GTTGCGCTGC GCACCACCAT GCAGGGCGAA 
GACCATCGCG CCATCAAGGA CGCCGTGGAT GCCCTGTCGC ACGGCACCGA CGAATTCGCC 
GCGCGCCGCA TGGACCGCGG CATTCGCAAG GCGCTCGCCG GCAAACGGAT CGAGGAGCTC 
GGCTGA 

 

Protein sequence

MALLQISEPG ESPAPHQRRL AVGIDLGTTN SLVASVRSSV PEVLPDDQGR PLLPSVVRYL 
PTGGAHIGYK AQAEAVRDPK NTIISVKRFM GRGLKDVAHI ENTPYDFVDA PGMVQLKTVA 
GVKSPVEVSA EILATLRQRA EDTLGDELVG AVITVPAYFD DAQRQATKDA AKLAGLNVLR 
LLNEPTAAAI AYGLDNAAEG IYAVYDLGGG TFDISVLKLT KGVFEVMSTG GDSALGGDDF 
DQRIVCWIVE QAGLQPLSAE DTRLLLNKAR AAKEWLSTAD STEIDAMLST GETVHLVLTA 
ETFAELTATL VQKTLSPVRR ALRDAGVTVE DVKGVVLVGG ATRMPIIRRA VGQLFGQTPL 
TNLDPDQVVA IGAAMQANLL AGNRAPGEDW LLLDVIPLSL GVETMGGLVE KIIPRNSTIP 
VARAQEFTTF KDGQTAMAIH VLQGERELAS DCRSLARFEL RGIPPMVAGA ARIRVTYQVD 
ADGLLSVSAR ETVSGVEASI TVKPSYGLAD DDVARMLQEG FQSAEDDMRR RALAEERVEA 
ERLLEALSQA LAADGDLLSP EERAAIDAEI VALRTTMQGE DHRAIKDAVD ALSHGTDEFA 
ARRMDRGIRK ALAGKRIEEL G