| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0947 |
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| Symbol | |
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| ID | 8018579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 998572 |
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| End bp | 999531 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829726 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_002980919 |
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| Protein GI | 241662559 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.103002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0230828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCC GCCGTCGCCG CGCCCTGCAA CTTGGCGTGG GCTCTGCCGT AGCCGCTGCT
CTGCCGTTCC CGTTTTCGCT CGCGCATGCC GCTAACCAGC CGCCCAAGGT GGCGTTGGTG
ATGAAGTCGC TTGCCAACGA GTTCTTCCTG ACCATGGAGA ACGGCGCACG TAAGCATCAG
AAGGATCACG CGTCGGAGTA TTCACTGCTG ACCAACGGCA TTCGCGACGA AACCGACACC
GCTGGCCAGA TTCGTCTGGT CGAGCAGATG ATCGTCGCGC GCGTGGATGC GCTGGTGCTG
GCCCCGGCCG ATTCCAAGGC GTTGGTGCCG GTCGTCAAGA AGGCCGTGGA CGCGGGCATT
CTCGTCATCA ACATCGACAA CAGGCTGGAC CCCGCGGCAC TGAAAGAGAA AGGGCTGAAC
GTGCCCTTCG TGGGGCCGGA CAACCGCAAG GGTGCACGAC TGGTGGGCGA CTTCGTTGCC
AAGTCGCTCA AGCCGGGCGA TGCCGTGGGC ATCATCGAAG GCATACCGAC CACCACGAAC
GCCCAGCAAC GTACCGCTGG CTTCAAGGAC GCCGCCGAAG CCGCCAAGCT GAAGATCGCG
GGCGTGCAAT CGGGCGAATG GGAAATCGAC AAGGGAAACA AGGTGGCAGC CGCCATGCTG
CGCTCCGAGC CCGACCTGAA GGCCCTGCTG TGCGGCAACG ACAACATGGC GATCGGCGCC
GTCTCGGCGG TGCGCGCAGC CGGCAAGCTG GGCAAGGTGC TGATTGGAGG CTATGACAAC
ATCGACGCCA TCAAGGCCAT GCTGGCGGAT GGGCGTGTCG TCGCGACTGC CGATCAGCAC
GCCGATCAGC AAGCCGTCTA CGGCATCGAA ACCGCGCTGA AGGCCTGGGC CTCCAAGACG
CCGCAGGCGA AGCTGTCGGG TGTCGTCGAG ACACCGGTCA ACCTCGTCAC GCGCACGTAA
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| Protein sequence | MDIRRRRALQ LGVGSAVAAA LPFPFSLAHA ANQPPKVALV MKSLANEFFL TMENGARKHQ
KDHASEYSLL TNGIRDETDT AGQIRLVEQM IVARVDALVL APADSKALVP VVKKAVDAGI
LVINIDNRLD PAALKEKGLN VPFVGPDNRK GARLVGDFVA KSLKPGDAVG IIEGIPTTTN
AQQRTAGFKD AAEAAKLKIA GVQSGEWEID KGNKVAAAML RSEPDLKALL CGNDNMAIGA
VSAVRAAGKL GKVLIGGYDN IDAIKAMLAD GRVVATADQH ADQQAVYGIE TALKAWASKT
PQAKLSGVVE TPVNLVTRT
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