Gene Rpic12D_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0929 
Symbol 
ID8018561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp977525 
End bp978406 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content61% 
IMG OID644829708 
ProductAAA ATPase central domain protein 
Protein accessionYP_002980901 
Protein GI241662541 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0240465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.607082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA CCACCTCGCC TGCCCCATCC GACCAGCGCA CACGCTTCGA AGGCTCTGAC 
CAGTACGTCG TCACCGATGA CCTCAAGCTT GCCGTCAACG CATCGATGAC GCTGCAGCGC
CCGCTGCTCA TCAAGGGCGA GCCGGGCACA GGCAAGACCA TGCTGGCCGA GGAAGTGGCC
GCCGCACTGG GTATGCCGCT ATTGCAGTGG CACGTGAAGT CGACCACCAA GGCCCAGCAA
GGCTTGTACG AATACGATGC CGTCTCGCGC CTGCGCGACT CGCAGCTCGG CGATGACAAA
GTGCACGACA TCCGCAACTA CATCGTCAAG GGCGTGTTGT GGCAGGCCTT CGAGGCGGAC
GAACCTGTCG TGTTGCTGAT CGACGAGATC GACAAGGCCG ACATCGAATT CCCCAACGAT
CTGCTACGCG AACTGGATCG CATGGAGTTC TACGTGTACG AAACGCGCGA AACCATCCGC
GCCAAGCACC GCCCGCTGGT GATCATCACG TCGAACAACG AGAAGGAATT GCCCGACGCG
TTCCTGCGCC GCTGCTTCTT CCACTACATC AAGTTTCCCG ATGCCGAGAC GATGCAGGCG
ATCGTCGATG TGCACTACCC AGGTATCAAG CCGACACTGG TCAAGGCCGC GCTAGATGCG
TTCTACGAGA TGCGCAACCT GCCGGGGCTG AAGAAAAAGC CGTCGACGTC GGAGCTGATC
GACTGGCTCA AGCTGCTGCT GGCCGAAGAC ATTCCGCCGG AATCGCTGCG CAGCCAGGAC
AAGAACGCCG CCATTCCGCC GCTGCACGGG GCGCTGCTCA AGAACGAACA GGACGTGCAC
CTGTTCGAGC GCCTGGTATT CATGAACCGC GCCAACCGCT GA
 
Protein sequence
MNTTTSPAPS DQRTRFEGSD QYVVTDDLKL AVNASMTLQR PLLIKGEPGT GKTMLAEEVA 
AALGMPLLQW HVKSTTKAQQ GLYEYDAVSR LRDSQLGDDK VHDIRNYIVK GVLWQAFEAD
EPVVLLIDEI DKADIEFPND LLRELDRMEF YVYETRETIR AKHRPLVIIT SNNEKELPDA
FLRRCFFHYI KFPDAETMQA IVDVHYPGIK PTLVKAALDA FYEMRNLPGL KKKPSTSELI
DWLKLLLAED IPPESLRSQD KNAAIPPLHG ALLKNEQDVH LFERLVFMNR ANR