| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0915 |
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| Symbol | |
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| ID | 8018547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 963907 |
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| End bp | 965097 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644829694 |
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| Product | putative transcriptional regulator, GntR family |
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| Protein accession | YP_002980887 |
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| Protein GI | 241662527 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.262681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCACA CCGCCTGTAC CTTCTCCAGC CGCGCTCAGA AACTCACCAG CTCGGCGATC
CGGGAAATCC TCAAGATCAC CGAACGTCCT GAGGTCATTT CGTTTGCCGG CGGCCTGCCC
GCCCCCGTCA CCTTCCCGGT CGAAGCGATT CAGGCGGCGT GCGCCCGCAT GTTTGCCGAC
AACCCGCAGG CTTCGCTGCA GTACACGCCG ACGGAAGGCC TGTCGGTGCT GCGCGAGTGG
ATTGCCCAGC GTCATGGCAC CACCGCCTCG CGCGTGCTGA TCACCACGGG CTCGCAGCAG
GGGCTGGACC TGCTCGGCAA GATCTTCATC GACCCGCAAA GCAAGGTGCT GGTCGAAACG
CCGACGTACC TGGGCGCGCT GCAGGCGTTC TCGCTGTTCG AGCCGACCTA TACGTCCATC
GCCACCGATG ACCAAGGTCT GCTGCCGGAC GCGCTCACGC CGGAGCTGGC GGCGGGCGCG
CGCTTCTTCT ACACGATCCC GAACTTCCAG AACCCGACCG GCCGCCGCCT GCCGCTGGAC
CGCCGCCAGG CCCTGGTGGC CCGCGCGAAG GAACTCGGCG TGCTGCTCGT AGAAGACGAT
CCGTACGGTG AACTGAGCTA CACCGGCGAC GCCCTGCCCT CGCTGCGCTC GCTCAATCCG
GACGGCGTGG TCTACATGGG CTCTTTCTCG AAGATCCTGG CGCCGGGCAT GCGCCTGGGC
TACATCATCG CGCCCGAGCA TATCCACTTC AAACTCGTGC AGGCCAAGCA GGCATCGGAT
CTGCACACGC CGAGCTTCAC GCAGCGTGTG GCGTACGAGG TGCTGAAGAC CGGGCTGCTC
GATACGCACA TCCCGAGCAT CCGAAACCTC TACGGCAAGC AATGCGAAGC GATGCTCGAC
TCGCTCACGC GCCATATGCC GGCCGGCGTG CACTGGAACC GTCCGGAAGG CGGCATGTTC
ATCTGGGTGG AAGTGCCGGA AGGCATCGAC ACGATGGCGC TGCTGGAGAA GGCCGTCGCG
CGCAACGTGG CGTTTGTGCC GGGCGCGCCG TTCTATGCCA ATGCGCCGCG CCGCAACACA
CTCCGCCTCG CGTTCGTAAC AGTGGCACCG GAGCGTATCG AGCAAGGCAT TGCCGTGCTG
GGCGAGTTGA TGCGCGCGGA AATCGCGGCG CTCACGCCCA AGGCCGCCTA A
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| Protein sequence | MDHTACTFSS RAQKLTSSAI REILKITERP EVISFAGGLP APVTFPVEAI QAACARMFAD
NPQASLQYTP TEGLSVLREW IAQRHGTTAS RVLITTGSQQ GLDLLGKIFI DPQSKVLVET
PTYLGALQAF SLFEPTYTSI ATDDQGLLPD ALTPELAAGA RFFYTIPNFQ NPTGRRLPLD
RRQALVARAK ELGVLLVEDD PYGELSYTGD ALPSLRSLNP DGVVYMGSFS KILAPGMRLG
YIIAPEHIHF KLVQAKQASD LHTPSFTQRV AYEVLKTGLL DTHIPSIRNL YGKQCEAMLD
SLTRHMPAGV HWNRPEGGMF IWVEVPEGID TMALLEKAVA RNVAFVPGAP FYANAPRRNT
LRLAFVTVAP ERIEQGIAVL GELMRAEIAA LTPKAA
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