Gene Rpic12D_0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0874 
Symbol 
ID8018505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp915371 
End bp916444 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content64% 
IMG OID644829653 
Productputative membrane-bound dehydrogenase oxidoreductase protein 
Protein accessionYP_002980847 
Protein GI241662487 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.159521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGCCG CTTGGCTTGG CGCGGGGCCG GCAGCGCTCG CAAAGCTGCC CGTCGAGTCA 
GTGCGGGTAC CGCCGGGTTT CCATGTCGAA GTACTGACCG ACGCAATGCC AGCAGCCCGC
GAAATGGCAC TCTCTCCAGC CGGCATTCTT TATGTAGGCA GCCGCGCGGG CAAGGTGTAC
GCGATGTCGT TGCAAACGCC GGATGCGCCG ATCCATGTGG TCGCGTCTGG GCTGCAATTG
CCGGTGGGCG TGGCATGGCG TGACGGCAAC CTTTATGTGT CGGCCGTTTC ACGCGTGCTG
AGGCTCGACG GCATTGACAG CCGGCTCGGT AATCCGCCGG ACCCGGTGAT CGTCAACGAC
AAGCTGCCGA CGGAAACGCA TCACGGGTGG AAATTCATTG CGTTCGGGCC GGACGGCAAG
CTGTATGTGC CGGTGGGCGC ACCTTGCAAC ATATGCCGCC CCGATGAGAA CCGGTACGCC
AACCTCATGC GCATGAACGC CGATGGAAGC AGACTGGAAC TCGTGGCGCG CGGCATCCGC
AATACGGTCG GCTTCGACTG GCACCCGAGC ACGCACGAAT TGTGGTTCAC CGACAACGGC
CGCGATCTCA TGGGTGACGA CGTGCCAGAC GACGAACTGA ACCGCATCAC CAAGCCCAAT
CCGCACTTTG GCTATCCGTT CTGCCACGCC GGCGACATTC CGGACCCCGA GTTCGGTGCC
GGACATCCGT GCTCAGACTA CACACCACCG GCCGCGAGGC TCGGGGCCCA CGTAGCGGCC
TTAGGCATGC GCTTTTATAC GGGCAGCAGC TTTCCGCCGG AATACCGAAA CAATGTCTTC
ATTGCGGAGC ATGGTTCGTG GAACCGATCG TCAAAGGTGG GCTACCGCGT CGTGCGCGTC
GTTCTGGACG CCGCCGGCAA TGTCACGAAG CAGGAGCCGT TCGCCCAGGG CTGGCTGCAA
GGTGAGAGGG CCTGGGGACG CCCCGCAGAT GTGCTCGTGG CACCGGACGG CAGCCTGCTG
GTCTCCGACG ACTTGGCGGG CGCGGTGTAT CGAATCCACT ACACCGGGAA ATGA
 
Protein sequence
MLAAWLGAGP AALAKLPVES VRVPPGFHVE VLTDAMPAAR EMALSPAGIL YVGSRAGKVY 
AMSLQTPDAP IHVVASGLQL PVGVAWRDGN LYVSAVSRVL RLDGIDSRLG NPPDPVIVND
KLPTETHHGW KFIAFGPDGK LYVPVGAPCN ICRPDENRYA NLMRMNADGS RLELVARGIR
NTVGFDWHPS THELWFTDNG RDLMGDDVPD DELNRITKPN PHFGYPFCHA GDIPDPEFGA
GHPCSDYTPP AARLGAHVAA LGMRFYTGSS FPPEYRNNVF IAEHGSWNRS SKVGYRVVRV
VLDAAGNVTK QEPFAQGWLQ GERAWGRPAD VLVAPDGSLL VSDDLAGAVY RIHYTGK