Gene Rpic12D_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0815 
Symbol 
ID8018445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp847205 
End bp848320 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content68% 
IMG OID644829594 
Productpurine nucleoside permease 
Protein accessionYP_002980788 
Protein GI241662428 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG5042] Purine nucleoside permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCC TATCTGACAA GGTCGACGCC CCGCCACCGC AGCCGCCGCA CCGGCTGCTC 
GGGCGCAAAG GCAAACGATT GGCCCGTGCC GTCGCGGTTG GCGCGCTGCT GACGGCGGGC
GTTGGCGCGT CGACGCAGCC GGGTGCGCAA CTCGCACCGG AATCGCACGC GCGCAAGGTC
AAGGTGCTGA TCATCAGCAT GTTCGCGCCC GAGGCGCAGC CGTGGATCGA CAAGCTCGGC
CTCACGCAGG ACGTGCCGGT GCCGGGCCTG TCCATCGACT ACCCGAACGT GCATTGCAAT
GCCAGCGACG TCTGCCAGCT CACCACGGGC ATGGGCAAGG CGAATGCCGC GTCGTCGGTC
TCGGCGCTCA TCTACAGCGG CAAGTTCGAT CTGCAGCGCA CGTACTTCCT GGTGGCGGGC
ATTGCGGGGA TCGACCCGTC GCAGGGCACG CTCGGCAGCG CCGCGTGGGC GCGCTTCCTG
GTCGACAGCG ACATCGCGTG GGAGATCGAT GCGCGCGAGG TGCCCGCCAG CTGGCCGAAC
GGTTTCATCG GCATCAACAC GCAAGGCCCA GGGCAGAAAC CGCCGCTGGA TTACAAGACC
GAAGTCTTTC GCGTGAACGA GGCGCTGCTG CAGAAGGCCC TGGCGCTCTC CAAGGGCGCG
GTGCTGGACG ACAACGCCAC CGCACGGGCC TATCGTGCCA ACTACCCGAG CGCACCCGCC
AACCAGCCGC CGTCTGTCGT GCAATGCGAC ACCGCTGCCG GCAACACGTA CTGGCACGGC
GCCAAGCTGG GCGAGCGCGA AGCCGCGTGG GTCAAGCTGC TGACGGACGG GCAGGGCACG
TATTGCACCA CGCAGCAGGA AGACAACGCC ACCTTTGAGG CGCTCACGCG CGGCGCGAAG
GCGGGGCTGC TCGATCTGCA GCGGGTGGCC GTGCTGCGCA CTGCATCCAA CTTCGACCGG
CCGTATCCGG GGCAGACGCC GTACGACTCG CTGGTCAACA GCAACTCGGG CGGGTTCGTG
CCGTCGCTCA ACAACCTGTA CCTGGCGGGC GGTCCGCTGG TCAACGAGAT CGTCACGCGC
TGGAGCGTGT GGAAACACGG AGTGCCCTCG CCATGA
 
Protein sequence
MSVLSDKVDA PPPQPPHRLL GRKGKRLARA VAVGALLTAG VGASTQPGAQ LAPESHARKV 
KVLIISMFAP EAQPWIDKLG LTQDVPVPGL SIDYPNVHCN ASDVCQLTTG MGKANAASSV
SALIYSGKFD LQRTYFLVAG IAGIDPSQGT LGSAAWARFL VDSDIAWEID AREVPASWPN
GFIGINTQGP GQKPPLDYKT EVFRVNEALL QKALALSKGA VLDDNATARA YRANYPSAPA
NQPPSVVQCD TAAGNTYWHG AKLGEREAAW VKLLTDGQGT YCTTQQEDNA TFEALTRGAK
AGLLDLQRVA VLRTASNFDR PYPGQTPYDS LVNSNSGGFV PSLNNLYLAG GPLVNEIVTR
WSVWKHGVPS P