Gene Rpic12D_0809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0809 
Symbol 
ID8018439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp838902 
End bp839900 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content64% 
IMG OID644829588 
ProductTriacylglycerol lipase 
Protein accessionYP_002980782 
Protein GI241662422 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0610177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGA CTTCCCTGTT CCATGTTGTG TATGGATCCG TGCGCGGCTT CCTGCGCACG 
CACGCTGCAG CCGCTGTCTT GGCCACCTCC GCCCTCACCC TGGGTACCGT CGCACCGGCG
CAGGCCGCCG GCACCTATGC GGCAACCAAG TACCCGATCG TGCTGGTGCA TGGCCTGTCG
GGCACCAGCA AGTTTCTCGG CGTGGTCGAT TACTGGTACC AGATCCCCGA AGACCTGCGT
GCCAACGGCG CCAATGTCTA CGTGGCCGAT GTCTCCGCCT TCAACGATGA AACCGTGCGC
GGCGAACAGC TCGTCAGCCA GATCCGCAGC GTGCTGGCTA CGACGGGCGC CGCCAAGGTC
AACCTCATCG GACACAGCCA GGGCGGACTG ACATCGCGCT ATGCAGCCGC CGTGGTGCCG
AACCTCGTAG CCTCCGTCAC CACCATCGGC ACGCCGCACA AGGGGTCGGA GTTTGCAGAC
TTTGTGGAGT CGACACCGGC CCCGTTCAAG GCGCTCGTGA ACCTCGGTGC CGATGTATTC
GGCTCGGTGC TCGGCTGGTT CAACGGCAAC AGCAATCCGC AGAACGGTTT TGCGGCGCTG
CATATCCTGT CGACGTCGGG CGCGGCTGAT TTCAATAAGG CGTTCCCCAG CGCGGGCCTC
GCCAGCGGAT GCAACACCGG CAGCGCCACC GACGTGCGCA ATGGCAACGT GCAGAAGCTG
TATTCGTGGA CGGGCCGCTC CACTGCCACC AACGTGCTCG ACGTGTTTGA TCCGGTGCTG
GTTTTCAGCG GAAGCGTCAT GCAGGCGCGC GGTTCGGGGA CGAACGACGG GCTTGTCTCA
GTTTGCAGCG CGAAGTTCGG GCAGGTCTTG TCGACGGATT ACGCGTGGAA TCACCTGGAT
GAGGTCAACC AGCTGCTCGG CCTGATCGGT TGGGGCGCGG CCGACCCGGT TGCGGTGATC
CGCACGCAGG CCAATCGGCT GAAGACTGCA GGCCTCTGA
 
Protein sequence
MSQTSLFHVV YGSVRGFLRT HAAAAVLATS ALTLGTVAPA QAAGTYAATK YPIVLVHGLS 
GTSKFLGVVD YWYQIPEDLR ANGANVYVAD VSAFNDETVR GEQLVSQIRS VLATTGAAKV
NLIGHSQGGL TSRYAAAVVP NLVASVTTIG TPHKGSEFAD FVESTPAPFK ALVNLGADVF
GSVLGWFNGN SNPQNGFAAL HILSTSGAAD FNKAFPSAGL ASGCNTGSAT DVRNGNVQKL
YSWTGRSTAT NVLDVFDPVL VFSGSVMQAR GSGTNDGLVS VCSAKFGQVL STDYAWNHLD
EVNQLLGLIG WGAADPVAVI RTQANRLKTA GL