| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0783 |
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| Symbol | |
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| ID | 8018412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 810961 |
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| End bp | 812358 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644829561 |
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| Product | integrase family protein |
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| Protein accession | YP_002980756 |
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| Protein GI | 241662396 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.282397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.170816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACAA AACTGCCCCG TGGTGTCCGT CTAGCTACTT GGAAGAACAA GGACGGTACA
AGTACCACCA AGTATAGAGT CGAGATCAAG AGAAAGGGTT GGAAAGGTGA AACGAACAAA
CTGTTCGATA GCCTTCAAGA AGCAGTTTCC TATCTTGCTT TAAGCAAGTT AAAGAAAGGT
CAGGAGCTTT TATATTCAAT CTCCGAAGAA GAACGAATTA AAAAGAATGT AGAACTCCAA
CAAGGAACAA ACAAGGATTT TTCGTTTGGT TTCTTCGCTC AAAAATACTT GGAAGATTAT
GTTTTCAATC AGCCTGCTGA TACTGAATTG AAACGACGAA ACCAAGCAAT GAAAAAAGCC
TTTATCACGA AGATTTGTAA TATTTCTATC GTAGATCGGT ATTTAACCCC AGAAGAAAAA
GACGAAATGG GTTTGGAAAA AGACGAGATA GTTTACCGAT TCTTCAAAGG CTTTGATGTT
AGAACTCAAA TAAAGCCTAT CGATATAAAC AACTATATCA AGACTCGATT AAAAGGCGAC
AAGGTCAACC GTGCTGTAAA ACCTGTTAGT GTCGTCAGAG AAATTACTTT TATCTCCAAT
GTATTTAACA AACTCATTCA TTTTGATGAA TCACTGGAAG ATATAAGGAA CCCAACCCGA
GACTATGATA AATCCCTTCT TCAAAATGTA GTCAATGTCA GAAAAAGGGT TTTATCAGAT
CAAGAAGAAG AGAAATTTTT GGAAGTGATC AACGGATATT CAAATAAACA GCTTGCTGAT
ATTTGTAAAA TTTCCTTGCT TACTTCAATG AGAAGATCTG AAATCGTCTT TCTGAAAAAA
GACCAGATAA GAGACGATTT TAAATACATT CACCTACCGA TTACTAAATC CAAGAAGTCC
AGAGATGTCT ATTTAGACGA AACAGCAAGA GAATTTTTTA GGCAACTACA ACCAGCAGAG
AAAGCAAAAG ACGGTCGATT TTTCACCTAT TCAAATTCTG GTTTTGGAAA AGTCTTTGCT
GATTTAATGA AAAGAAATGG ATTAGAAAAC ATTCATTTTC ACGATTTAAG AAGAACCAAA
ATTTCAAGAA TGCTCTCGAT AGGTGGAGAT AAAAATACGA TTTTGATTGC GAAACTTTTA
GGTTTTCAAT CAGTCAGGAA GTTCGAAGAC ATACACCTAA CAGAGAAACA TAAAGGAATC
GAAACCCAAG AAGCTATGTT AAGCACCTTC GGACACGGCA ACATAGACAC CAACTACAAG
CATTATTTTA ATCCCGTTTT AAGTGAAGTC GATAAGATTG AACGGATGAG ATTTTTGAAA
GAGAAGAAGA AAGTCGACAA TTTAACCCCA CAAGAAAACG ACGAGCTTCT ATCACTTCTT
ATCGAACTAA CCAACTAA
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| Protein sequence | MATKLPRGVR LATWKNKDGT STTKYRVEIK RKGWKGETNK LFDSLQEAVS YLALSKLKKG
QELLYSISEE ERIKKNVELQ QGTNKDFSFG FFAQKYLEDY VFNQPADTEL KRRNQAMKKA
FITKICNISI VDRYLTPEEK DEMGLEKDEI VYRFFKGFDV RTQIKPIDIN NYIKTRLKGD
KVNRAVKPVS VVREITFISN VFNKLIHFDE SLEDIRNPTR DYDKSLLQNV VNVRKRVLSD
QEEEKFLEVI NGYSNKQLAD ICKISLLTSM RRSEIVFLKK DQIRDDFKYI HLPITKSKKS
RDVYLDETAR EFFRQLQPAE KAKDGRFFTY SNSGFGKVFA DLMKRNGLEN IHFHDLRRTK
ISRMLSIGGD KNTILIAKLL GFQSVRKFED IHLTEKHKGI ETQEAMLSTF GHGNIDTNYK
HYFNPVLSEV DKIERMRFLK EKKKVDNLTP QENDELLSLL IELTN
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