| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0773 |
|---|
| Symbol | |
|---|
| ID | 8018402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 802012 |
|---|
| End bp | 802839 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644829551 |
|---|
| Product | transcriptional regulator, IclR family |
|---|
| Protein accession | YP_002980746 |
|---|
| Protein GI | 241662386 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.424221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.199782 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGA CCCGTCTCCC CGATCCCGAA TTCGACACCG CGCCCGCCGA GTCGAGCGAC
CCGAATTTCG TCACGGCGCT CGCGCGCGGG CTGGAACTGC TGCGCGCATT CCGCCCTGGC
GACACGTTGC TCGGCAACCA GGAATTCGTC CGGCGCACGG GCTTTCCCAA GGCCACAGTC
AGTCGATTGG CCGGCACGCT GGTGTCGCTC GGTTACCTGC GCTACGACGA TGCGCTCGGC
AAATACGGGC TCGACGCCGG TGTGCTCGCA CTCGGGTTTG CCTACCTGGC CTCAAGCGAC
GTGATCCAGC TCGCGCGGCC GCATATGAGC GCATTTGCGC AGCGCTATGG GGTATCGATC
TCGCTGGGCA AGCGCGATCG GCTGGACATG GTGTATCTGG AGACGATCCG CCACGACAGC
CCGTCGATGA GCGGGTCGTC CGGGCTGGGC GTGGGCTCGC GGCTGTCGCT GCTGTCGAGT
TCGATGGGTC GGGCGTATCT GGCTTCGTTG CCGGCAGCGC GGCGTGAGCG CCTGTACGAA
GCATTGCGCA CGCAGCAGCC CGCGCAATGG GCGGCAGAAG GTGCCGCTGC AGACGATGCA
GTGAAAGCCG GCGTACGCAA TGGTTACGCC GTATCGCTGC GCGACTGGCA TCCCGCCATC
CACGCATGCG CAGTCGCGTT CTTCGCGCCA AGCCAGCGCG AGCCGTATGT CGTGAGTTGC
AGCGCGCCAC ACACGTCCGC CGATGCAGAG CGCATCCGCG ACGAACTGGC CCCCGCGCTA
CGCGAGTTTG CGGCACGGCT AGGCCAAGTG GTTGAGCCCG CCGCGTAG
|
|---|
| Protein sequence | MSTTRLPDPE FDTAPAESSD PNFVTALARG LELLRAFRPG DTLLGNQEFV RRTGFPKATV
SRLAGTLVSL GYLRYDDALG KYGLDAGVLA LGFAYLASSD VIQLARPHMS AFAQRYGVSI
SLGKRDRLDM VYLETIRHDS PSMSGSSGLG VGSRLSLLSS SMGRAYLASL PAARRERLYE
ALRTQQPAQW AAEGAAADDA VKAGVRNGYA VSLRDWHPAI HACAVAFFAP SQREPYVVSC
SAPHTSADAE RIRDELAPAL REFAARLGQV VEPAA
|
|---|
| |