Gene Rpic12D_0771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0771 
Symbol 
ID8018400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp798922 
End bp800304 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content65% 
IMG OID644829549 
ProductXanthine/uracil/vitamin C permease 
Protein accessionYP_002980744 
Protein GI241662384 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.811834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.167198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC AGTCCATTCC GTCGTCGACG GAACTTGGCA CCGCTGGCAT CGCCGATGCG 
CGTGCCATTG ATCGCTATTT CCAGATTTCT GCACGCGGCA GCACGCAAAA GCGCGAGGTC
GTGGCTGGCA TCACAACCTT CATGGCGATG GTCTACGCCG TATTTGTCGT GCCCGGCATG
CTGGGCAAGG CCGGCTTTGA TACCAGCGCA GTGTTCGTCG CGGTGTGTCT GACCACCGCC
TTCGGCTCCC TGCTCATGGG CTTGTGGGCC AAGCTGCCGA TCGCCATCGG CTGCGCAATC
TCGCTGACCG CGTTCATGGC CTTTGGCCTG GTGCTGGGGC AAAAGCTGTC GCCGGAAATC
GCGCTCGGCG CGGTGTTCCT GATGGGTGTG GTCTTCACCG CCATCTCGGC CACGGGCGTG
CGCTCGTGGA TTCTGCGCAA CCTGCCTTCG GGCGTGGCAC ACGGCACGGG CATCGGCATT
GGCCTGTTCC TGCTGCTGAT CGCGTCCAAC GACGTGGGGC TGGTCGTCAA GAACGCCGGT
GCGGGCCTGC CCGTTGCACT GGGCCACGTC ACTGCCTTCC CGGTGATGAT GTCGGTGCTG
GGGCTGGCCG CCATCTTCGG CATGGAGCGT CGTCGCGTGC CGGGCGGCAT CCTGATCGTG
ATCATTGCCA TCTCGGTCCT GGGCCTGATC TTTGACCCGG CCGTGAAGTT CACCGGCGTG
TTCGCCGTGC CCTCGCTCGC CGCTGCAGGG CATGCCTCGC TGATCGGCAC AATGGATATT
CGCGGCGCAC TTACGGCCGC CGTGCTGCCC AGCGTGCTGG CTCTGGTGAT GACCGCCGTG
TTCGATGCCA CCGGCACGAT CCGCGCAGTC GCCGGCCAGG CCGGGCTGCT CAACGACAAG
GGCCACATCA TCAACGGTGG TCGCGCGCTC ACGGCCGATT CGATCAGCTC GATCTTCTCG
GCGTTCTTCG GCGGGGCTCC TGCGGCCGCC TACATCGAGT CGACGGTTGG CGTGGCGGCT
GGCGGCAAGA CGGGCCTGAC GGCCGTGGTG GTCGGCCTGA TGTTCCTGGC CGTGATGTTC
TTCTCGCCGC TGGCGGGACT GGTGCCGTCG TACGCAACGG CCCCGGCGCT GATGTATGTC
GGCTTGCTGA TGCTATCCAG CGTGAGCAAG CTGCACATGG ACGACATGGT CGACGCGCTG
TCCGGGCTGG TCTGCGCCGT GTTCATCGTG CTGACCTGCA ATATCGTCAC CGGCATCATG
CTTGGCTTCA GCACGCTGGT CATCGGCCGC CTGGTGGCCG GCGAATGGCG CAAGCTGAAC
ATCGGCACCG TGGCGATCGC CGCTGCACTG GTCGCGTTCT ACGCAGGCGG CTGGGCGATC
TGA
 
Protein sequence
MAEQSIPSST ELGTAGIADA RAIDRYFQIS ARGSTQKREV VAGITTFMAM VYAVFVVPGM 
LGKAGFDTSA VFVAVCLTTA FGSLLMGLWA KLPIAIGCAI SLTAFMAFGL VLGQKLSPEI
ALGAVFLMGV VFTAISATGV RSWILRNLPS GVAHGTGIGI GLFLLLIASN DVGLVVKNAG
AGLPVALGHV TAFPVMMSVL GLAAIFGMER RRVPGGILIV IIAISVLGLI FDPAVKFTGV
FAVPSLAAAG HASLIGTMDI RGALTAAVLP SVLALVMTAV FDATGTIRAV AGQAGLLNDK
GHIINGGRAL TADSISSIFS AFFGGAPAAA YIESTVGVAA GGKTGLTAVV VGLMFLAVMF
FSPLAGLVPS YATAPALMYV GLLMLSSVSK LHMDDMVDAL SGLVCAVFIV LTCNIVTGIM
LGFSTLVIGR LVAGEWRKLN IGTVAIAAAL VAFYAGGWAI