Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0770 |
Symbol | |
ID | 8018399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 798152 |
End bp | 798790 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644829548 |
Product | Peroxidase |
Protein accession | YP_002980743 |
Protein GI | 241662383 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.142805 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTAC GTTTGGGCGA TATCGCCCCT GATTTCGAGC AGGATTCCAG TGAAGGCCGC ATCAAGTTTC ATGAGTGGCT GGGCAATAGC TGGGGCGTGC TTTTTTCGCA CCCGGCCGAT TACACGCCGG TCTGCACCAC CGAACTGGGC CTGACCGCCA AGCTGAAGGA CGAATTTGCC AAGCGCAATG TCAAGGCGAT TGCGCTGTCG GTCGACTCGG TTGAGTCGCA CAAGGGCTGG ATCAACGATA TCAACGAGAC GCAGAACACC AGCGTCAACT TCCCGATCAT TGCCGACCCC GATCGCAAGG TCTCGCAGCT GTACGACATG ATTCATCCGA ATGCGAGCGA GACGTTTACC GTGCGTTCGT TGTTCGTGAT CGATCCGAAC AAGAAGATTC GCCTGACGAT TACGTATCCG GCATCGACGG GGCGCAATTT CAATGAAGTG CTGCGTGTGA TCGACTCGCT GCAGTTGACC GAGTACCACA GCGTGGCCAC GCCGGGTAAC TGGCAGGACG GCGATGACGT GGTCATCGTG CCGTCTCTGA AGGATGAGGA AGTCATCAAG CAGAAATTTC CGAAGGGCTA CAAGGCGTTG CGCCCGTATC TGCGCCTGAC GCCGCAGCCC AACAAGTGA
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Protein sequence | MSLRLGDIAP DFEQDSSEGR IKFHEWLGNS WGVLFSHPAD YTPVCTTELG LTAKLKDEFA KRNVKAIALS VDSVESHKGW INDINETQNT SVNFPIIADP DRKVSQLYDM IHPNASETFT VRSLFVIDPN KKIRLTITYP ASTGRNFNEV LRVIDSLQLT EYHSVATPGN WQDGDDVVIV PSLKDEEVIK QKFPKGYKAL RPYLRLTPQP NK
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