Gene Rpic12D_0764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0764 
Symbol 
ID8018393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp794283 
End bp795092 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content65% 
IMG OID644829542 
Producthypothetical protein 
Protein accessionYP_002980737 
Protein GI241662377 
COG category[R] General function prediction only 
COG ID[COG0390] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID[TIGR00245] conserved hypothetical protein TIGR00245 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0571603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCC AGGACCTCTC CCTTTCCGCC TGGCAGGTCG GTATTGCGGC TGCACTGATC 
CTCGTGAATG GCGCACTGTC CGTTGGACTG GGCCTCGGGC TCGAGCGACG CCTGGCGTGG
GCGGCCGTGC GCACCGTGGT GCAATTGCTG GCGGTGGGCT TCGTGCTCGA ATGGGTATTC
GCCCACGCGC ATTGGGCGGT AGTGCTGGGC ATCGTGGCTG TAATGACGCT GATTGCGGGG
CACGCAACCG GCAGCCGCGG CGCGCGCAGT TACACGGGCT TGCGGCTGGA CGGTACGTTG
TCGGTTTTCG GCAGCACATG GCTGATCGGC GCGATCGGGC TGGTGGCCGT GCTGCATGCG
CGCCCGTGGT ATGAGCCGCA ATATGCCATC CCGATCATGG GGATGATTCT TGGCAACACG
CTCACCGGCG TAAGCCTGGC GCTCGAGCGC ATGACCGGTG AGCTGACTGC CACGCGCGAC
CAAGTGGAGA CGATTCTTGC GCTCGGCGGC ACGCGCTGGG AAGCGGCGCG CAACGCAGCG
CGAACGGCCG TTCGCGCCGG CATGACACCG ATCATCAACC AGATGACCGT GGTGGGCGTG
GTGAGTCTGC CCGGCATGAT GACGGGCCAG GTGCTGGCGG GGCAGTCTCC TTTAGAGGCC
GTGCGCTACC AGATCGTCAT CATGTTCCTG CTGGCGGCAT CTTCCGGGCT GGGGACGGTT
GCGGCCGTGC TGCTGGCCTA TCGCCGGCTG TTCAGCCGTG AGCACCAGTT GCTGACTGCA
CGCATCACAC AAATCGGCGG AGCGAAATAG
 
Protein sequence
MNGQDLSLSA WQVGIAAALI LVNGALSVGL GLGLERRLAW AAVRTVVQLL AVGFVLEWVF 
AHAHWAVVLG IVAVMTLIAG HATGSRGARS YTGLRLDGTL SVFGSTWLIG AIGLVAVLHA
RPWYEPQYAI PIMGMILGNT LTGVSLALER MTGELTATRD QVETILALGG TRWEAARNAA
RTAVRAGMTP IINQMTVVGV VSLPGMMTGQ VLAGQSPLEA VRYQIVIMFL LAASSGLGTV
AAVLLAYRRL FSREHQLLTA RITQIGGAK