| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0727 |
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| Symbol | |
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| ID | 8018354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 758847 |
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| End bp | 759875 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644829503 |
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| Product | protein TolA |
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| Protein accession | YP_002980700 |
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| Protein GI | 241662340 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00429068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0892562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACGA CGTCGTTGCA CCGTTACGAG CCTGTTCGCG AGCGCGGCAC GCTGCGCGCG
TTCGGGCTGG CGGTCCTGAC ACACGTTCTG CTGGTCATCT TTCTGTACTT TGGCGTGCAG
TGGCAGAGCA GTACCCCGCG CGGCGAGGAG GCTGAACTGT GGGACGAGGC GGCGGTTCAG
CAGGCCGTGC AGCAGGCCGC GCCGGTGCCC GAGGTCAAGC CCGAACCGGT GATCAAGGCG
CCGCCGGCCA AGGTGGAAGA GGAAGCGGAT ATCGCGCTGG AGCAGCAAAA GCGCAAGCGC
GAACAGGAGG CTGCTGCCGC CCGTGAGGCC GAACTCGCTC GCCGCGCCGC CGAAGAACGG
GCAGAAGCCC AGCGTCAAGC CCGTCTGAAG GAAGAACAAC AGGCGCGTCA GGCGGAACTC
CAACGGAAGG CCCTGGCCGA ACAGCGGGCC AAGGAAAAGG CCGCTGAGAA GGCTGCCGCG
GACGCAGCGC AGGCCCGCAA GAATGCACAG CTTCAAGCCC AGGCCGAAGC GAAGGCGAAG
GCGGAAGCCG AGGCGAAGCA GAAGGAATTG AAGGCCAAGG CCGCCGCAGA AGCCAAGGCC
AAGGCCGATG CCGAGCGTAA GGCAAGTGAA TCGCGCGCCA ACGCACAACG CCAGGCGCAG
CTGGAACGGC TGCGTGCGAT GGCCGGTGCG GGTGCGACGG GCACGGTGGC GGGTTCCGGT
GGCGGTGTCG GCAATGCCCA GGGCACGGGC GGTACGGCGT CGGCCGGATA CGCCGAGCGT
GTGCGGGCCA AGGTCAAGCC GAACATCCTG TTCGATCCGT CGGCCGTCAA TGGCAACCCG
TCTGCCGTCG TGTCGGTGCA GATGGCGCCG GACGGTTCGA TCCTGTCCAA GCGCCTGACG
AAATCGAGTG GCAACGGCGC CTATGACGAG GCCGTGATGC GCGCAGTTGA GCGCTCCGAC
CCGCTGCCGC GCGATATCAA CGGCAAAGCG CCGTCGAGCG TCATCCTGAC GTTCCGGCCG
AAGGAATAA
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| Protein sequence | MTTTSLHRYE PVRERGTLRA FGLAVLTHVL LVIFLYFGVQ WQSSTPRGEE AELWDEAAVQ
QAVQQAAPVP EVKPEPVIKA PPAKVEEEAD IALEQQKRKR EQEAAAAREA ELARRAAEER
AEAQRQARLK EEQQARQAEL QRKALAEQRA KEKAAEKAAA DAAQARKNAQ LQAQAEAKAK
AEAEAKQKEL KAKAAAEAKA KADAERKASE SRANAQRQAQ LERLRAMAGA GATGTVAGSG
GGVGNAQGTG GTASAGYAER VRAKVKPNIL FDPSAVNGNP SAVVSVQMAP DGSILSKRLT
KSSGNGAYDE AVMRAVERSD PLPRDINGKA PSSVILTFRP KE
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