| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0644 |
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| Symbol | |
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| ID | 8018270 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 677177 |
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| End bp | 682412 |
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| Gene Length | 5236 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 63% |
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| IMG OID | 645945408 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.129883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTGT TCCTGTGCGA GAAGCCGTCC CAGGGCAAGG ACATCGCCCG TGTGCTGGGC
GCCGGCCAAC GCGGCAACGG CTGCTACAGC GGTGCCGGTG TCGTCGTGAC CTGGTGCATC
GGTCATCTGG TCGAGGCGGT TCCGCCGGAA GGCTACGGCG AGCAGTACAA GCGCTGGGCC
ATCGAACAAC TGCCCATTCT TCCCGAGCGC TGGCGTGTCG AGCCCAAGGC GGCGACCGCT
GCGCAGTTCA AGGTCGTGCA GCAGCTCGTC GCCAAGGCGG GCGAGCTGGT GATCGCGACC
GACGCTGATC GCGAAGGGGA GATGATCGCC CGCGAGATCA TCGAGCTGTG CGGCTACCGC
GGCCCGATCC AGCGGCTGTG GCTGTCGGCG CTCAACGATG CGTCGATCCG CAAGGCGCTG
GGTGCACTCA AGCCATCCGC CGAGACGCTG CCGCTGTACT TCTCCGCGCT CGCCCGATCG
CGTGCTGACT GGCTGATCGG GATGAACCTG AGCCGCCTGT TCACGCTGCT GGGCCGCCAG
GCCGGCTACA ACGGCGTGCT GTCGGTCGGG CGCGTGCAGA CGCCGACGCT CAAGCTGGTC
GTGGACCGTG ATCGTGAGAT CGCACGCTTC GTCTCGGTGC CGTTCTGGGC CATCGAAGTA
GCGCTGTCGC ATGCAGGCCA GTCCTTCGTC GCAAGCTGGA CGCCGCCACA GGGCAGCACC
GACGACGCCG GCCGCTGCCT GCAGCAGCCG GTGGCGCAGC AGGCCGCCGT GCGCCTGCGC
GCGGCCGGCG CCGCCCAGGT GCTTTCGGTG GAGACCGAGC GCGTGCGCGA AGGCCCGCCG
CTGCCGTTCG ACCTCGGCAC CTTGCAGGAG GTGTGTTCCA AGCAATTGGG CCTCGACGTG
CAGGAGACGC TGGACATTGC CCAGGCGCTG TACGAGACGC ACAAGGCGAC GACGTATCCG
CGCTCGGATT CGGGCTACCT GCCCGAGAGC ATGCTGGCCG ACGTGCCGGC CGTCCTCGAC
AGCTTGGTCA AAACCGATCC CGGCCTACGG CCACTGATCG ACCGCCTGGA TCGCCAGCAG
CGTTCGCGGG CCTGGAACGA CAGCAAGGTC ACGGCGCACC ACGGCATCAT TCCGACGCTG
GAGCCGGCCA ACCTCTCGGC GATGAGCGAG AAGGAGCTGG CCGTCTACCG GCTGATCCGC
GCCCACTACC TCGCGCAGTT CCTGCCGCAT CACGAGTTCG ACCGGACGGT GGCGCAGCTC
ACGTGCGGCG GGCAGTCGCT GGTGGCGGTC GGCAAGCAGA TCGCGGTGGC CGGATGGCGC
CAGGTACTGG CGGTGCCGGA GCCCGAGGAC GGTGACAGCG AGGACGCGCA GCGCGGCCAG
GTGCTACCGG CGCTGCGTGC TGGAGCAGCC TGCCAGGTCG GCCAGGTCGA ACTGAAGGCG
TTGAAGACGC TGCCACCCAA GCCCTACACG CAGGGCGAGT TAGTCAAAGC CATGAAGGGC
GTTGCCAAGC TCGTGACCGA CCCGCGCCTG AAGCAGAAGC TCAAGGACAC CACGGGCATC
GGGACCGAGG CCACGCGCGC CAACATCATC AGCGGGCTGT TGGCCCGCGG TTATCTGTTG
AAGAAAGGCC GGGCCATCCG CGCGTCGGAT GCCGCCTTCG GGGTCGATTT GTTTTCGTTG
TCAAAAGTGA CGGTAGGAGA TCGAGCACTG GCGTAGGGGT GGTCTGATAA GCCCTTGATT
TCATTGGTTT TCCTGTTCAC TTTTTCAGGC GTATTGTGTC TGCCCCAATC ACCGGAGACA
CAAGATGCAA AGCTGGCACA CAACCTACCT TGGCCTGCGA GAGCTGCCAA GGGAAATCAG
CACCTTCGAG CTTCAGTCGT TTTTCACGTA CAGCCGTACT GAGCGCGAGC TCATCAACGC
CCGCCGAAGC AACGCCCACA AGCTGGGTCT GGCACTGCAC ATAGGTTTCT TGCGCTTGAG
CGGGCGCCTG CTGAATTCGG TGCGCATCGT TCCGACAACC CTGTGGCGCC ATCTGGGTGA
CGAAATCGGC ATCACTGCTG TTGAACTGGC ATCCCTGCGA GCCCTGTATG TTCGCGGTCG
AACCCTCTTT GACCATCAAC AACTGGCCTG TGATGTCCTG GGGTTTCATT GGATGACGGA
GCACCAACGT CGCGCCCTGG TACGCACCCT GCGCGATGAG GTGGCCCGCT GCGCCGATCG
GGATCAATTG CTCGTATTCG CTCGGCGCTG GTTGTATCAA AGCAAGATCC TGATCCTGCG
CGACCGTGAC ATCCGTGTCC TGGTCACAGC GGCGCTGGGA CAACTCGAAG AAGAAACAGC
CAAAACGATT GCGGCATCTG TGCTGCCCGA ACAACTGGTG CGCTGGCGGG ATGCCATGGC
CGCATTGCGC CCGGATGGGC AAACCCAGCA GAGCTGGTTG TGGTCGGCAC CGGCCAAACA
CTCAACCAAA CAAATTGGCG AGGTGTTCGA GCGAATCGAA CTGCTGTACG CCCTGAATGT
CCACAAACAC CTGGACGACC TGTCCGGTCT CATTGTGCGG CGCTATGCAC GCCGCCTGGC
TTCAAGGCCT CCCTCGGTGG GGGCCAGGAT CAAAGAACCC GCTCGCACAG TGGAGGTTGG
CTGCTTTTTA CGGCACTGCC TGTTTACCAG CACAGACCAA GCTATCTTGA TGGTTCAGCG
GCGCGTTGCC GATCTTTGGC GCACGGTCGC AGCAGGTGTC ACGGAGACGG TCAATTGGGC
TGACCTGTAC AAGACATTGC TGGCAGAGCT GGCTGGTTTG GTCGCCCAGG GTGAACTTCA
AGACGCGGAG TTGCGGGCTC GAATTGTTGC CCTGCTCAGT GCCAGCCAGC AAGGCAAACC
ACCCAGCCGG GCCTCGGTGG TGCGTGAGCG TTTGTTTGAC GCCATACGTC CCGTGCGCTC
TTTGCTGGCC GAAATCACCA AGCTGCCCTG GCAGGCCAAT AGCGAGCACC CGGTGACCAC
AGCCTTGGCC CAATTGACGA AACTGTACGC GGGCAAACTT CGCGAACTAC CTGCTGATGT
CAGCGCCCCT CGCTTGGGTT CGGTCTGGAG CGGCGCGATT GCGGGTGCCG ACCGGGAGCG
CGCGTTTCGG GCCTTGGAGG TGGCCACCCT GTTTTCATTG CGACGTGCCG TGCGCAACGG
TTCGGTGTGG ATTGAGCACA GCCTGAGCTT TCGTGGCCGC GCACGCCTGT TCTTCACTGA
TGCGCGCTGG CAGGAAGAAG CCAAACGGCA CTATGCCCGA CTGTCACTGC CAGCCAATGC
ATCCACACTT TTGAAGCCGT TGCTGGCCAA GGTACGCGCC GGCGTGGAGG CAGTGGCCGT
CGCCGCGCGC AGCGGTGTGC TGCGCGTGGA CGAAGAACTC CACCTTTCAG TATTGCCGGC
AGAGGATGAA GATCCAGAGG TGATTAAGTT GAGGGCCAAA CTTGACCTGA GGATCGGTGA
GGTGCAACTC CCAGAAGTGA TCCTGGCCGT TGACGCTCAG GTACGTTTCA GCTGGATCAT
GCTTGGCCGC GAGCCACGTT CGACAGAAGA GCTGCTGATG GTCTACGCCG GCATCATGGC
CCACGGCACC AGTCTGACGG CGGCCGAATG CGCCCGTATG ATTCCGCAGT TGTCTGCCAC
CAGCATCCGT CAGGCCATGC GTTGGGCCGG GGACGAGCGT CGCTTGAGTC AAGCCTGCCA
CGCGGTGCTG GAGTTCATGC AACGGCACCC CATTGCAGCG ACATGGGGTC GCACGGACCT
GGCGTCGTCC GACATGATGA GCATGGAAAC CACCCAACGG GTGTGGCAGG CCCGACAGGA
TCCAAGACGC AACACGTCCT CGATTGGCAT CTACTCCCAT GTGCGTGACC GATGGGGGAT
CTTCTACGCG CAGCCTTTTG TGCTCAATGA GCGCCAGGCA GGGGTCGCCA TTGAGGGTGT
CGTGCGCCAA GAATCCATCG AGACCAGCCA GTTGGCGGTG GACACCCACG GCTACACCGA
CTTTGCCATG GCGTTGGCCC GGCTACTGGG GTTCGATCTA TGCCCACGAC TGAAGGAATT
GAAGCAGCGT CATCTGTACG TGCCGCGTGG CACGATCATT CCACCGGAGA TCGCAGCAGT
TTGCGAGGCT ACCGTCGATA CCGCTTTGAT TGAGAAGCAC TGGGACACCT TGGTCCATTT
GGCAGCCTCG GTGATGAGCG GCAACGCCAG CGCAGTTGCA GCGCTGGCCA GATTTGGATC
GGCGGCGCGG GGAGACCCCA TCTACGAAGC GGGTGTTCAG TTGGGGCGCT TGCTGCGAAC
TGCGTTCCTG GCCGACTACT TTGTCAAAGA CGCCTTCAGG AATGAGCTGC GTCGGGTACT
CAACCGGGGT GAGGCGGTCA ATGCCTTGAA GCGGGCGATT TATACCGGCA GAGTGAGCCC
GGCTCAGGCC AAGCGGGCCG AGGAAATGCA GGCGGTGGCT GACGCCTTGA GTCTGTTGGC
CAACATCATC ATGGCCTGGA ACACAACCCA GATGCAGGCC GTTCTGGACC GCTGGGCCAA
CCGGCGTCAG GTCATCCCGG CGGAGCTCAC GGGGAAAATT GCGCCGACGC GGCTGCAAGG
TATCAATTTG AGGGGCGTAT TCCGCTTTCC AGTGGAGCGT TATGCCAGTG AAATCCTGCC
GTCACAGACC ACGCCGAAAA CCGGGACCGG CGGTTGAAAC CGAGCACGCT TTTGCGCCCT
CAAACGGCGA TCAAAAAAAT CAACAGGAAA CCCAATGAAA TCAATGGCTT GGCAGGCCAC
CCCTACGCCA GTGCTCGATC TCCTACCGTC ACTTTTGACA ACGAAAACAA ATCGACCCCC
CTTCACACTG ATCGATGCCG TGCCGGTGGC CATCGCCGAC CCGGGCACCA CGGCGGTGTG
GGAGCAGGCG CTGGACATGA TCGAGGCCGG CCAGATGACG CTGGACACCT TCATCGCCAA
GCAATCGAGC TGGGTCGCCC AACTCGTGCA GCAGTACCGC GGCGCCACGC TTGCCATCAA
TTTGCCGCCC GCGCCGAGCT GCCCGCAGTG CGGCGCACCT ATGCGCCAGC GCAGCGGCAA
GAGCGGCGCG TTCTGGTCTT GCAGCCGTTA CCCGGACTGC AAGGGCACGC AGCCGGTCGA
AGATGCCGCG GCAGGCAAGC GCGGCGCATC CAGTCGTGCA TCCGGCCCAC CGCGTCGGCT
CCCCAGGGCG AACTGA
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| Protein sequence | |
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