Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0602 |
Symbol | |
ID | 8018228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 637874 |
End bp | 639190 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644829381 |
Product | 3-deoxy-D-manno-octulosonic-acid transferase |
Protein accession | YP_002980579 |
Protein GI | 241662219 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.338886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCC TTCTGTATCG CTGGTTGTGG CGCATCGCGC TGCCGTTTGC GTTGGTGCGC CTCTGGTGGC GCGGTCGCAA GGAGCCCGGT TATCGCCAGC ACGTCGGCGA GCGGCTGGGT TTCTACCCGC CGCGCCCGAA TCCGGATCGT CCATTGCTGT GGGTGCATGC GGTGTCCGTT GGCGAGACAC GCGCCGCGCA GCCGCTCATC GATGCGCTGC TTGCGCGCTT TCCGCACCAC GCTGTCCTGC TGACGCACAT GACGCCGACG GGCCGCCGCA CCGGCGCTGA ATTCGCGGCG CAGCGCAACG GCCGCGTCAT CCAGGCCTAT CTTCCGTACG ATTTGCCCAG CGCAGTCGAT CGGTTTCTGC GCCATTTCCA ACCGCGCCTT GGGCTGCTGA TGGAGACCGA GATTTGGCCG GTGCTGATTG AGCGCGCCTA TGCGGCTGGT GTGCCGATGG TGCTCGTCAA CGGGCGCCTG TCTGCGCGCA GTCACCGGCG CACCGCACGC CTCGGTGACG CCGCGCGCCA GACGTACGGG CAACTCGCCG CGGTGCTGGC ACAGACGCCC GACGATGCTG ATCGCTACCG CTCGCTCGGC GTGCCGCGCG TGCGGGTGAC CGGCAACCTG AAGTTCGACA TCACGCCGCA TGTGGACCAG ATCATGGCTG GCCGCGTGCT GCACGATGCA TTGCACGGTC GCTCAGCATG GGTGGCGGCC AGCACGCGTG AGGGCGAAGA GGCGTTGCTG CTCGACGCAT GGCTGGCACA TCGCGCGCAG CATGTCGGGC GCCGGCATGC GTTGCTGATC CTTGTGCCGC GTCATCCTCA GCGCTTTGAT GAAGCGGGCC AGGCCGCCGA GCGCGCGGGC CTACGCGTCG TGCGTCGCAG TGCGTTGTCG GTGTCGGCAG CAGGGTTGAC GGATTCCGAT CGACTTGCTG AGGCCGATGT CTTGCTTGGT GATTCGATGG GCGAGATGGC GCTGTATTAC GCAGCTGGCG AAGTGGCCTT CATTGGCGGT AGTCTGCTTC CGCTCGGTGG ACAGAACTTG ATCGAGGCCT GCGCAGTTGG CACGCCCGTG GTCATCGGCC CGCATACATT CAACTTCGCG CAGGCAACGC GCGATGCAGT GGCCGCAGGC GCGTGCGCGC AGGTGGCCGA TGCCGCCGCG GCCGTACGTG TGATCGACGC GTGGCTGTCC GATGCCGATG CGCGCGAAGC CGCATCACGT GCCGCGCTGG CGTTTGCCGC CACACACGGC GGTGCGACGG CCCGTACGGT GGAGGCGGTG GCGTCTCTCG TCTTGCCGAC GCTGTAA
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Protein sequence | MLRLLYRWLW RIALPFALVR LWWRGRKEPG YRQHVGERLG FYPPRPNPDR PLLWVHAVSV GETRAAQPLI DALLARFPHH AVLLTHMTPT GRRTGAEFAA QRNGRVIQAY LPYDLPSAVD RFLRHFQPRL GLLMETEIWP VLIERAYAAG VPMVLVNGRL SARSHRRTAR LGDAARQTYG QLAAVLAQTP DDADRYRSLG VPRVRVTGNL KFDITPHVDQ IMAGRVLHDA LHGRSAWVAA STREGEEALL LDAWLAHRAQ HVGRRHALLI LVPRHPQRFD EAGQAAERAG LRVVRRSALS VSAAGLTDSD RLAEADVLLG DSMGEMALYY AAGEVAFIGG SLLPLGGQNL IEACAVGTPV VIGPHTFNFA QATRDAVAAG ACAQVADAAA AVRVIDAWLS DADAREAASR AALAFAATHG GATARTVEAV ASLVLPTL
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