| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0601 |
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| Symbol | |
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| ID | 8018227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 636876 |
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| End bp | 637874 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644829380 |
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| Product | lipopolysaccharide heptosyltransferase I |
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| Protein accession | YP_002980578 |
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| Protein GI | 241662218 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.100938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTGC TGATCGTCAA AGTGTCGTCG CTTGGCGATG TGGTGCATTG CACGCCGGTG
GTGGCCGATA TCCTGCGTGC GCATCCGGAT GCCGAGATTG ACTGGGTGGT CGAGGAGGGT
TTCGCCGGCA TCGTCCGCAT CGTGCGTGGC GTGCAGGGCG TGATTCCGTT CGCGCTGCGG
CGGTGGCGCA AGTCGCTCGG CTCCGGCAGG ACTTGGGGCG AGGTGGCGGC GTTCCGTCGC
GCGTTGCGAT CCAAGTCGTA CGACGCGGTG CTCGATACGC AAGGCCTGAT CAAAACGGCG
CTCGTGGCTG CGCAGGCCAA GCTGGCGCCG GGTGGTTTCG TGGCGGGCTT CGGCAATCGG
ACGGAAGGCG CAGGCTATGA GCCGCTTGCG AAGCTGTTCT ACCAACGCAA GGTCGAAATG
GAACCGCACA TCCACGTAGT CGAGCGCTCG CGCCGCATGC TGGCGGAGGC GCTCGGTTAT
GCGCTGCCTG ACGCCATCGA CTTCGGTTTG CAGCCGCCGG CCGACTTGCC GTTCAATCTG
CCGCGTCCGT ACGTGGCACT GGTGCACGCG ACTTCGCGCG CCGACAAAGG GTGGCCGCTG
GAGGCGTGGG TGGATGTCGC ACGCGCGCTG CTTGCACGCG ACTACGCTAT CGCCTTGCCG
TGGGGCAGCG AGACCGAGCG ACGCACGAGT GAATCCATCC GCGAAGCCAT CGTCGCGGCG
GTGCCGGGTA CGGTCGGACG CGTGGTGATT CCGCCGCGCA TGTCGCTTCC CGATGTGACG
GCGTTTCTCG ATCAAGCGAC GGCAGTGGTG GGCGTGGACA CGGGACTCGT GCACATTGCC
GCCGCGCTGT GCAAGCCGAC CGTCGCGCTT TACAACTTCA CCACGTCGTG GCGTACCGGC
GGCTATTGGA CGCCCAATGT GCACGACATC GGCAGCGCCG AAGCGCATCC CACCAGCGCG
CAGGCGCTCG ATGCGCTGCG TGCGCTGGGT GTGCTCTGA
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| Protein sequence | MRVLIVKVSS LGDVVHCTPV VADILRAHPD AEIDWVVEEG FAGIVRIVRG VQGVIPFALR
RWRKSLGSGR TWGEVAAFRR ALRSKSYDAV LDTQGLIKTA LVAAQAKLAP GGFVAGFGNR
TEGAGYEPLA KLFYQRKVEM EPHIHVVERS RRMLAEALGY ALPDAIDFGL QPPADLPFNL
PRPYVALVHA TSRADKGWPL EAWVDVARAL LARDYAIALP WGSETERRTS ESIREAIVAA
VPGTVGRVVI PPRMSLPDVT AFLDQATAVV GVDTGLVHIA AALCKPTVAL YNFTTSWRTG
GYWTPNVHDI GSAEAHPTSA QALDALRALG VL
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