Gene Rpic12D_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0561 
Symbol 
ID8018187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp591027 
End bp591395 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content60% 
IMG OID644829340 
Productresponse regulator receiver protein 
Protein accessionYP_002980538 
Protein GI241662178 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.718467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCA AGAAAGTGTT GGTGGTCGAT GATTCTCCGA CCGAAGCGCT GCACCTGTCG 
GAGATTCTCG GCAAGAACGG TTTCAAGGTG ACGGTCGCTG CCGATAGCGA GCAGGCCATG
ACCAAGCTCG AAGCCGAAAC CTTCGACCTG ATCCTGATGG ATGTGGTGAT GCCGGGCCAG
AACGGCTACC AGGCAACCCG CGCCATCAAG AAGGACGAGC GCTTCCAGGG CATCCCCGTG
ATCATGTGCA CGACCAAGGG CCTGGAGACC GACCGCGTGT GGGGCATGCG CCAGGGCGCA
TCGGACTACA TCGTCAAGCC GGTGAAGGCC GAAGAGCTGC TCGAGAAGAT CGCCAAGCTG
GCGCAGTGA
 
Protein sequence
MAIKKVLVVD DSPTEALHLS EILGKNGFKV TVAADSEQAM TKLEAETFDL ILMDVVMPGQ 
NGYQATRAIK KDERFQGIPV IMCTTKGLET DRVWGMRQGA SDYIVKPVKA EELLEKIAKL
AQ