| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0502 |
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| Symbol | |
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| ID | 8018128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 532079 |
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| End bp | 533212 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829282 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002980480 |
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| Protein GI | 241662120 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.836386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC GCCGCACCCT CTGCGCCGCT GCTGCGCTGT TGCTTGCCAC TGCAGCCCAC
GCCGACATCG TCGTTGGCGT GAGCCTGTCG ACCACAGGTC CGTCGGCGTC GCTCGGGATC
ACGCAGAAGA ACTCGCTGGC GTTCTATCCG GATGCCATCG GCGGGGAAAA ACTGCGCCTT
GTGGTGGTGG ATGACGCCTC CGATCCGAGC ACCGGCACGC GCCTGGCGCG CAAGCTTGTG
ACGGAAGACC ACGTCGACAT CATCGTTGGC TCATCGGCGG TGGCACCGTC GATTGCGATT
GCCGAAGTCG CCACCGAATC GCACACGCCG CAACTGGCGT TGGCGCCGGT CGAGCTGAAA
CCGGGCAAGG GCGATTGGAC CTACCGGCTT GCGCAGCCGA TCTCGCTGAT GGCCGAGGCG
ATTGCCACGC GCATGGCGGC GTCTGGCATC AAGAACGTCG GTTTCATCGG CTTTGCTGAC
GCGTACGGCG AGAGCTGGCT CAAAGACTTC ACCGCTGCCG CCACGCCGCG CGGCATCAAG
ATCGTTGACG TAGAGCGCTA CGCCCGCGCA GATACCAGCG TGACAGGGCA GGTCGCCAAG
CTGGTCAGTA TCAAGCCCGA TGCGGTCCTG GTGGCCGGCG CGGGCACGGG CGCTGCGCTG
CCGCACACCG CGTTGCGCGA TCGCGGTTAT GTGGGGCCGA TCTATCAGAC GCACGGCGCG
GCGACCAAAG ACCTGATCCG CATCGGCGGC AAGGCGGTCG ATGGAGCCAT CCTGCCGGCC
GGCCCGGTGA TCGTGGCGGA GCAATTGCCC GACAGCCACC CGAGCAAAAA GACGGCGATT
GAATACGTGA CGCGCTATGA GAAGGCCAAC GGCCCCGACA CGCGCACGCA GTTCGGTGCC
CACACGTGGG ATGCGCTGCA GGTGCTCCAG CGCATCGTGC CGGTGGCGCT CAAGAAGGCC
AAGCCGGGCA CATTGGAGTT CCGCCAGGCG CTGAAGAATG CGCTGGAATC GGAGCACGAC
ATTGTCGTTT CGCACGGGGT GCTCAACTAC ACGTCCACGG ATCACTTTGG CTTTGATGCG
CGCGGTCGCG TATTGCTGAC CATCGACCAC GGCAAATGGA AATTGCTGAA CTGA
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| Protein sequence | MTIRRTLCAA AALLLATAAH ADIVVGVSLS TTGPSASLGI TQKNSLAFYP DAIGGEKLRL
VVVDDASDPS TGTRLARKLV TEDHVDIIVG SSAVAPSIAI AEVATESHTP QLALAPVELK
PGKGDWTYRL AQPISLMAEA IATRMAASGI KNVGFIGFAD AYGESWLKDF TAAATPRGIK
IVDVERYARA DTSVTGQVAK LVSIKPDAVL VAGAGTGAAL PHTALRDRGY VGPIYQTHGA
ATKDLIRIGG KAVDGAILPA GPVIVAEQLP DSHPSKKTAI EYVTRYEKAN GPDTRTQFGA
HTWDALQVLQ RIVPVALKKA KPGTLEFRQA LKNALESEHD IVVSHGVLNY TSTDHFGFDA
RGRVLLTIDH GKWKLLN
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