Gene Rpic12D_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0500 
Symbol 
ID8018126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp529869 
End bp530591 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content67% 
IMG OID644829280 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002980478 
Protein GI241662118 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.162166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.780963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGTC CGATCAAGCT GGTTTCCGGT TCCGCCCAAA CCGCGCCGGC ATCTGCACCG 
TTTGCCGTCG AACCTGCCGC GCATGCGCCC AAGGGCGCCG CCATGCGTGA ACTCGCCTAC
AACGAGATCA AGCGCCGCAT CATGGCGTGC GAATTCCGCC CCGGCGAGCC GCTGAACGAA
GCGCAGCTCG GCGCGCTGCT GGGGCTGGGC CGCACGCCCA TCCACCAGGC GCTGCATCGG
TTGGAGGTGG AGGGGCTGGT GCAGATCCTG CCGCGCAAGG GCGTGCTGGT GACGCCACTG
TCGCTCAACG ACGTGCTCGA CATGATCGAG GTGCGCGCCA CCAACGAGAT CCTCTGCGTA
ACGCTGGCCG CCGAGCGTGC CCACCCGGCC GATTTCGAGG CCATGCGCGC CATCGTCGAA
GCATCGCCCG CGCTGATCGA GCACCGCGAC ATTGCCGCGC TGGCCGCGCT GGACCTCAAG
TTCCACCTCG CCATTTCCGC GGCCTCGCGC AACCGCGTGC TGGCCGAATT GCTGCGCGGC
CTGCACGAGA AGCAGGCGCG CTTCTGGTTC CTGTCGCTGT CAGAGCCGCA ACACCTGCAG
AACGTGTACG ACGAGCACCT TGCCGTGCTC GATGCGCTGG AGCGCCGTGA TGTGCCTGCT
GCACGCGAAG CCATTCGCGA GCACATCGAC GAATTCCGCC GCACGATCAT CCGCACGCTC
TGA
 
Protein sequence
MSRPIKLVSG SAQTAPASAP FAVEPAAHAP KGAAMRELAY NEIKRRIMAC EFRPGEPLNE 
AQLGALLGLG RTPIHQALHR LEVEGLVQIL PRKGVLVTPL SLNDVLDMIE VRATNEILCV
TLAAERAHPA DFEAMRAIVE ASPALIEHRD IAALAALDLK FHLAISAASR NRVLAELLRG
LHEKQARFWF LSLSEPQHLQ NVYDEHLAVL DALERRDVPA AREAIREHID EFRRTIIRTL