Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0498 |
Symbol | |
ID | 8018124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 527756 |
End bp | 529117 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644829278 |
Product | amidase |
Protein accession | YP_002980476 |
Protein GI | 241662116 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.798061 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGACGC CCCGCCCGAA CATGATCCGC GCGCTGGCCG CTGCCCTGGC CGCCGGCCGC ACCACCAGCG TCGCGCTGAC CGAAGCCGCG CTGGAGCGCG CCGAATCGCA TCGCGCCGCA GGCGGTACCG CCTATGTGAG CATCGACGTG CAGGCCGCGC TGGCGATGGC GCGCGCCGCC GATGCCGCGC GTGCGGCGGG CAACGTGCCC TCGCTGCTGG CCGGGCTGCC GGTGTCGATC AAGGATCTGT TTGACGTGGC CGGCCAGGTG ACGGCTGCGG GTTCGCGCGC CCTGGCCGAC CAGCCGCGCG CCACTGCCGA TGCCGCCGCC GTGGCACGCC TGCGCGCAGC CGGCGCCGTG CTGCTGGGCC GCACCAACAT GAGCGAATTC GCGTTCTCCG GACTGGGGCT GAACCCGCAC TACGGCACGC CGCGCACGCC AGCGGACGGC GCACGCGCAG CGGGCGGGTC CACGTCGGGC GGCGCCGTCA CCGTTGCGGG CGGCATGGCC GTGGCGGCGC TGGGTACCGA CACCGGCGGC TCGATCCGCA TTCCCTCTGC GTTCTGCAAT CTGACCGGCT TCAAGCCCAC CGCACGCCGC GTACCGATGA CGGGCGGCGT GCCGCTGTCC ACGTCGCTCG ATTCCGGCGG CCCGCTCGCC AACTCGGTCG ACTGCTGCGC AATCGTCGAC GCCGTGCTGA GCGGCGAGTC AGGCAACGAC GCGTTCGACA CCGCCGCCGT GCCGTTGGCC GGACTGCGCT TCGGCGTCAC GCAGGACTAT GTCGGCGCGG ATCTCGACAA CACGGTCGCC GTTGCATTCG AACGCGCTGT TGAACGGCTG GAACGTGCCG GCGCGCACAT CGTGCGTTTT GAATTTCCCG AGCTGCTGCA ACTGCCCGAG ATCAACAGCG GCGGCGGCTT CTCGGCAGCG GAATCCTGGG CATGGCATCG TTCGCTGCTC GCGCGCGCGG AAGCCCAGTA CGACCCGCGC GTCGCCACGC GCATCCGCCG TGGTGAACAG ATGAGCGCGG CCGCATACAT CGATGTGATC AACGCACGCG CACGCATGAT CGCCGCCGCT CGCAAGCGCC TGGGCCACTT CGATGCATGG CTGATGCCGA CGGTTGCCAT CGTGCCGCCC GAGGTCGCCC CGCTTGAAGC GGACGATGCA GCCTTCTTCC GCGTCAACGC CCTCGCGCTG CGCAATCCGA GCGTGATCAA TTTCCTGGAC GGCTGCGCGC TGACGCTGCC GGTACACGCG GCCGGTGAAC TGCCGGTCGG TCTGTCGCTC TGCGGTCTCG CCAACGACGA CGCGCGCATC CTGCGCGTCG GCCGGGCGGT GGAGGCAGCC CTGCGGCGTT GA
|
Protein sequence | MMTPRPNMIR ALAAALAAGR TTSVALTEAA LERAESHRAA GGTAYVSIDV QAALAMARAA DAARAAGNVP SLLAGLPVSI KDLFDVAGQV TAAGSRALAD QPRATADAAA VARLRAAGAV LLGRTNMSEF AFSGLGLNPH YGTPRTPADG ARAAGGSTSG GAVTVAGGMA VAALGTDTGG SIRIPSAFCN LTGFKPTARR VPMTGGVPLS TSLDSGGPLA NSVDCCAIVD AVLSGESGND AFDTAAVPLA GLRFGVTQDY VGADLDNTVA VAFERAVERL ERAGAHIVRF EFPELLQLPE INSGGGFSAA ESWAWHRSLL ARAEAQYDPR VATRIRRGEQ MSAAAYIDVI NARARMIAAA RKRLGHFDAW LMPTVAIVPP EVAPLEADDA AFFRVNALAL RNPSVINFLD GCALTLPVHA AGELPVGLSL CGLANDDARI LRVGRAVEAA LRR
|
| |