Gene Rpic12D_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0493 
Symbol 
ID8018119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp519487 
End bp520275 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content67% 
IMG OID644829273 
Productprotein of unknown function DUF1045 
Protein accessionYP_002980471 
Protein GI241662111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.301743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGG CGAGGGCACC CTTATCGTCA TCGATACCGA CGGCCTGGCG ATACGCGCTC 
TACCTGCTGC CGCCCGAGCC GTGGTACGGG TTGGGCACAC GGTGGCTCGG CCGCTGCGCC
CGCACCAACA CGGCCATCTC CGCAGATCAG CGCGAGGCAT TTGTGCGCGA AGCCGGCATC
GACCTCGCAA CGCTCGACCG CTGGACTGAA GCGCCGCGCC AGTACGGCCT GCACGCGACG
TTCAAACCGC CGTTCCGCCT GGCAAGCGAC CGTACGGTCG ATGAGCTGGA CGCCGCGCTG
CGCGGTTTTG CACTGCAGCA GCAGGCCTTC ACCATCGAGC CGGCCCTGCA GACGCTGCGC
GGCTTCCTGG CCTGGCGGCT GCGTCATGGC GATCCTGCCC GCGACACGCT CCACGCATTC
GCCGATGCGT GCGTCAGCGA ATTCGACGCC TTCCGCGCAC CGCCACCGCC CGCAGAACTC
GCGCGGCGCC GTCGCGTCGG CCTGTCGGAT GCGCAGGAGC TTCATCTGCA GCACTGGGGC
TATCCGTATG TGTTCGGTAC ATTCACGTTC CACATCACGC TGACCGGCCG GCTCGACCAT
GCCGAGCAGC TCGCGTGCTA TCGCGCGCTG GAAGCCACGC GCGTGGTGCT GCCAGCCGCC
ATGCCCATCG ACCACATCGC GTTGTTCTCG CAGGCTGCGC CGGAAGCGCC TTTCAACGTG
GTGCGTGTGT ATTGGTTTGA CGGCAGCACC GAAGACTTCA GCGCTGCACA CGGCACGCCT
AGCGCTTGA
 
Protein sequence
MQQARAPLSS SIPTAWRYAL YLLPPEPWYG LGTRWLGRCA RTNTAISADQ REAFVREAGI 
DLATLDRWTE APRQYGLHAT FKPPFRLASD RTVDELDAAL RGFALQQQAF TIEPALQTLR
GFLAWRLRHG DPARDTLHAF ADACVSEFDA FRAPPPPAEL ARRRRVGLSD AQELHLQHWG
YPYVFGTFTF HITLTGRLDH AEQLACYRAL EATRVVLPAA MPIDHIALFS QAAPEAPFNV
VRVYWFDGST EDFSAAHGTP SA