Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0429 |
Symbol | |
ID | 8018054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 449299 |
End bp | 450618 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644829208 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_002980407 |
Protein GI | 241662047 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.621378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGTCA ACGCGCAGCT GCGCCGCGTG GCCATCCTCG GCGGTAACCG CATCCCGTTT GCCCGCTCGA ACACGGCCTA CGCCACGGCT TCGAACCAGC AGATGCTGAC CGCCGCGCTG CAAGGCCTGA TCGACCGCTT CAACCTGCAT GGCCAGCGTC TGGACGAAGT CGTGGCCGGC GCGGTCATCA AGCACGCGCG CGATTTCAAC CTGACGCGCG AAACGGTGCT GTCTACCACG CTCGCCAAGC AGACGCCCGC GTACGACATC CAGCAGGCCT GTGGCACCGG GCTGGAAGCC GCCATCCTCG TTGCCAACAA GATTGCACTG GGGCAGATCG ACGTGGGCAT TGCCGGCGGC ACGGACACTA CCTCCGATGC GCCCGTCGGC CTGAACGAAA AGATGCGCAA GATCCTGCTG GAGGCCAACC GCGCCAAGTC CACGGGCGCG CGCGTCAAAG CGCTGGCCGG CCTGCGGCCA TCGATGTTCG TGCGCCCGCT CCTGCCGCGC AACAGCGAGC CGCGCACTGG CCTGTCGATG GGCGAACACT GCGAGCTGAT GGCCAAGCGC TGGGGCATCC GTCGCGAAGA CCAGGACGCG CTGGCCCTAC GCAGCCACCA CAACCTCACG GCGGCCTACG AGCGCGGGTT CTTCACCGAC CTGATGACCG CCCACCTCGG GCTCGATCGT GACAACAATC TGCGCAGCAA CTTGACCATC GAGCAACTGG CGAAGCTGCA GCCGGTATTC GACCGCAGCG CCGCCGGCAC CATGACGGCC GGCAACTCCA CGCCGCTCAC CGATGGCGCT TCGTGCGTGC TGCTCGCCAG CGAAGACTGG GCGCGCGCGC ACAACCTGCC CGTGCTCGCC TACATGACCT GCGCGGACAC GGCGGCTGTC GACTTCTTCA GCGGCACGCC GGAGCAGAAC GAAGGGCTCT TGATGGCCCC GGCCTATGCC GTTTCCCGCA TGCTGGAGCG CGCGGGCCTG ACGCTGCAGG ACTTCGACTA CTACGAGATT CACGAAGCCT TTGCAGCGCA AGTCCTGTGT ACGCTGGCGG CGTGGGAATC GCCCGAATAC TGTCGCGAAA AGCTGGGCCG CAGCGCGCCG ATGGGCAGCA TCGACCGCAG CAAGCTCAAC GTGAACGGCA GCTCGCTGGG CACAGGGCAT CCATTTGCCG CCACGGGCGG GCGCATTGTC GCGACGCTGG CAAAGATGCT GGCGCAGCGC GGCAGCGGCC GCGGGCTGGT GTCGATCTGT GCCGCGGGCG GGCAAGGTGT CGTCGCCATT CTGGAGCGAC CCGAAACGAT GTCGCAGTAA
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Protein sequence | MLVNAQLRRV AILGGNRIPF ARSNTAYATA SNQQMLTAAL QGLIDRFNLH GQRLDEVVAG AVIKHARDFN LTRETVLSTT LAKQTPAYDI QQACGTGLEA AILVANKIAL GQIDVGIAGG TDTTSDAPVG LNEKMRKILL EANRAKSTGA RVKALAGLRP SMFVRPLLPR NSEPRTGLSM GEHCELMAKR WGIRREDQDA LALRSHHNLT AAYERGFFTD LMTAHLGLDR DNNLRSNLTI EQLAKLQPVF DRSAAGTMTA GNSTPLTDGA SCVLLASEDW ARAHNLPVLA YMTCADTAAV DFFSGTPEQN EGLLMAPAYA VSRMLERAGL TLQDFDYYEI HEAFAAQVLC TLAAWESPEY CREKLGRSAP MGSIDRSKLN VNGSSLGTGH PFAATGGRIV ATLAKMLAQR GSGRGLVSIC AAGGQGVVAI LERPETMSQ
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