Gene Rpic12D_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0429 
Symbol 
ID8018054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp449299 
End bp450618 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content67% 
IMG OID644829208 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_002980407 
Protein GI241662047 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.621378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTCA ACGCGCAGCT GCGCCGCGTG GCCATCCTCG GCGGTAACCG CATCCCGTTT 
GCCCGCTCGA ACACGGCCTA CGCCACGGCT TCGAACCAGC AGATGCTGAC CGCCGCGCTG
CAAGGCCTGA TCGACCGCTT CAACCTGCAT GGCCAGCGTC TGGACGAAGT CGTGGCCGGC
GCGGTCATCA AGCACGCGCG CGATTTCAAC CTGACGCGCG AAACGGTGCT GTCTACCACG
CTCGCCAAGC AGACGCCCGC GTACGACATC CAGCAGGCCT GTGGCACCGG GCTGGAAGCC
GCCATCCTCG TTGCCAACAA GATTGCACTG GGGCAGATCG ACGTGGGCAT TGCCGGCGGC
ACGGACACTA CCTCCGATGC GCCCGTCGGC CTGAACGAAA AGATGCGCAA GATCCTGCTG
GAGGCCAACC GCGCCAAGTC CACGGGCGCG CGCGTCAAAG CGCTGGCCGG CCTGCGGCCA
TCGATGTTCG TGCGCCCGCT CCTGCCGCGC AACAGCGAGC CGCGCACTGG CCTGTCGATG
GGCGAACACT GCGAGCTGAT GGCCAAGCGC TGGGGCATCC GTCGCGAAGA CCAGGACGCG
CTGGCCCTAC GCAGCCACCA CAACCTCACG GCGGCCTACG AGCGCGGGTT CTTCACCGAC
CTGATGACCG CCCACCTCGG GCTCGATCGT GACAACAATC TGCGCAGCAA CTTGACCATC
GAGCAACTGG CGAAGCTGCA GCCGGTATTC GACCGCAGCG CCGCCGGCAC CATGACGGCC
GGCAACTCCA CGCCGCTCAC CGATGGCGCT TCGTGCGTGC TGCTCGCCAG CGAAGACTGG
GCGCGCGCGC ACAACCTGCC CGTGCTCGCC TACATGACCT GCGCGGACAC GGCGGCTGTC
GACTTCTTCA GCGGCACGCC GGAGCAGAAC GAAGGGCTCT TGATGGCCCC GGCCTATGCC
GTTTCCCGCA TGCTGGAGCG CGCGGGCCTG ACGCTGCAGG ACTTCGACTA CTACGAGATT
CACGAAGCCT TTGCAGCGCA AGTCCTGTGT ACGCTGGCGG CGTGGGAATC GCCCGAATAC
TGTCGCGAAA AGCTGGGCCG CAGCGCGCCG ATGGGCAGCA TCGACCGCAG CAAGCTCAAC
GTGAACGGCA GCTCGCTGGG CACAGGGCAT CCATTTGCCG CCACGGGCGG GCGCATTGTC
GCGACGCTGG CAAAGATGCT GGCGCAGCGC GGCAGCGGCC GCGGGCTGGT GTCGATCTGT
GCCGCGGGCG GGCAAGGTGT CGTCGCCATT CTGGAGCGAC CCGAAACGAT GTCGCAGTAA
 
Protein sequence
MLVNAQLRRV AILGGNRIPF ARSNTAYATA SNQQMLTAAL QGLIDRFNLH GQRLDEVVAG 
AVIKHARDFN LTRETVLSTT LAKQTPAYDI QQACGTGLEA AILVANKIAL GQIDVGIAGG
TDTTSDAPVG LNEKMRKILL EANRAKSTGA RVKALAGLRP SMFVRPLLPR NSEPRTGLSM
GEHCELMAKR WGIRREDQDA LALRSHHNLT AAYERGFFTD LMTAHLGLDR DNNLRSNLTI
EQLAKLQPVF DRSAAGTMTA GNSTPLTDGA SCVLLASEDW ARAHNLPVLA YMTCADTAAV
DFFSGTPEQN EGLLMAPAYA VSRMLERAGL TLQDFDYYEI HEAFAAQVLC TLAAWESPEY
CREKLGRSAP MGSIDRSKLN VNGSSLGTGH PFAATGGRIV ATLAKMLAQR GSGRGLVSIC
AAGGQGVVAI LERPETMSQ