| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0428 |
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| Symbol | |
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| ID | 8018053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 447459 |
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| End bp | 449198 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829207 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_002980406 |
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| Protein GI | 241662046 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0627658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG TTGCCGACCG CAGCGATCTG ACCGATCGCA TCTGGCTGAA GTCGTACCCC
GAGGGCGTGC CCGCGGAGAT CAATCCCGAT CGTTATCACT CGCTGGTCGA GGTGTTTCGG
GAATCGGTGG AGAAGTACCG TACCCGCGTC GCCTACGTGA GTGTCGGCAC CGAAATGACG
TACGGCGAGT GCGAGCGCCA GGCCAAGCAG TTTGCGGCGT GGCTGCAGTC GCGCGGTGTA
AAGAAAGGCG ATCGGGTGGC GATCATGCTG CCCAACAGCC TGCAGTACCC CGTGTGCCTG
TTCGGCACGC TGCTGGCCGG CGCCATCGTC GTCAACGTCA ACCCGTTGTA CACGGTGCCG
GAGCTGGCCC ATCAGTTGCG CGATTCCGGC GCACAAACGA TCGTGGTGCT GGAGAACTTC
GCGCGCACGC TGGAGCAGGC GCTGCCCGGC AGCCAGGTGC GCAACATCGT CATCACGGGC
ATCGGCGACC TGATGGGCGG GGCGCTCAAC CTCAAGGGCC GCGCGCTGAA CTTCGTGATG
CGCCACGTGC AGAAGCAGGT GCCGCCGTAC AAGCTGCCCT CGCCGGTCTG GCTGCGCGAT
GCGCTGGCCG CAGGAGGCTC ACGGACACTG CAGTCAGTGC AGCTGGCGCC GGAAGATCTG
GCCTTCCTGC AATACACGGG CGGCACCACG GGCGTGGCCA AGGGCGCAAT GCTCACGCAC
CGCAATATCA TCGCCAACCT GCTGCAGGCC GAAGAGTGGT CCAAGAGCAT GCTCAACGGC
GGCGTGGAAA CCAACGTCAC GCTGCTGCCG CTGTATCACA TCTTCTCGCT CACGGTGAAC
CTGCTGATGT TCATGACACT GGGCGGCCGC AATATCCTGA TCGCCAATCC GCGTGACACC
AAGCGCGTGA TCTTCATCCT GCGCAACGAA CGGTTCTCCG GCATTGCGGG GGTGAACACG
CTCTTCAACG CACTGCTGGA AGACCCGGAC TTCGCCAAGC GGGATTTCTC GGCCATGAAG
ATCACCATCG GTGGCGGCAT GGCGGTGCAG CGCGCCATTG CGCAGCGCTG GAAGGAAGTC
ACGGGCCACA CCATCGTTGA AGGCTACGGG CTAACGGAAT GCTCGCCGGT CGTGTCGATG
AACCCGCCGC ACGTGACCGA ATTCAGCGGC ACGATCGGGC TGCCCGCGCC GTCCACGGAA
GTGCGCTTCA AGCGCGACGA CGGCACGATC GCGCCGCTCG GCGAACCCGG CGAACTGCAG
GTGCGTGGGC CGCAGGTCAT GCGCGGGTAC TGGCAGCGCC CCGATGAGAC CGCCAAGTCC
ATCGACGCCG AAGGGTGGTT CTCCACCGGC GATATCGGTG TGATGGATGC CAACGGCTAC
ATCCGCCTGA TCGACCGCAA GAAGGACATG ATCCTCGTGT CGGGCTTCAA TGTGTATCCG
AACGAGATCG AAGACGTGGT GGCACTGCAC CCCGACGTGC TGGAGGTGGC GGCCATTGGC
GTGCCCGATC CGGTGGCCGG CGAGCGCGTG AAGATCATCG TGGTGCCGCG CACCGGCGCG
CTGACCGAGC CCGCCCTGCT CGAACACTGC CGCGCCCACC TGACCGGCTA CAAGATGCCG
CGCATCGTCG AGTTCCGCCA CGAAGAGCTG CCCAAGTCGA CCGTGGGCAA GATCCTGCGC
CGCGAACTGC GCGATGCCGA TCCGGACATC AAGCGCGCCC GCGCGCAAGC TCAGCAATGA
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| Protein sequence | MNTVADRSDL TDRIWLKSYP EGVPAEINPD RYHSLVEVFR ESVEKYRTRV AYVSVGTEMT
YGECERQAKQ FAAWLQSRGV KKGDRVAIML PNSLQYPVCL FGTLLAGAIV VNVNPLYTVP
ELAHQLRDSG AQTIVVLENF ARTLEQALPG SQVRNIVITG IGDLMGGALN LKGRALNFVM
RHVQKQVPPY KLPSPVWLRD ALAAGGSRTL QSVQLAPEDL AFLQYTGGTT GVAKGAMLTH
RNIIANLLQA EEWSKSMLNG GVETNVTLLP LYHIFSLTVN LLMFMTLGGR NILIANPRDT
KRVIFILRNE RFSGIAGVNT LFNALLEDPD FAKRDFSAMK ITIGGGMAVQ RAIAQRWKEV
TGHTIVEGYG LTECSPVVSM NPPHVTEFSG TIGLPAPSTE VRFKRDDGTI APLGEPGELQ
VRGPQVMRGY WQRPDETAKS IDAEGWFSTG DIGVMDANGY IRLIDRKKDM ILVSGFNVYP
NEIEDVVALH PDVLEVAAIG VPDPVAGERV KIIVVPRTGA LTEPALLEHC RAHLTGYKMP
RIVEFRHEEL PKSTVGKILR RELRDADPDI KRARAQAQQ
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