Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0421 |
Symbol | |
ID | 8018046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 440485 |
End bp | 441297 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644829200 |
Product | unkown domain/putative metalloprotease fusion protein |
Protein accession | YP_002980399 |
Protein GI | 241662039 |
COG category | [R] General function prediction only |
COG ID | [COG0319] Predicted metal-dependent hydrolase |
TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTAAAG CAAAAACCGA TACCAAAGCA AAAACCAAGA AGACCCAGCT CGCGGCCGCG GAGTCGCTCG GCCCGCGCGT TGACGTATTC GACGCCCAAG GCAAACCGAA GACGGTGGAT GCGAGCGCGC TGCGCATTGC GTTCGCCGAT GGCCGCAGCC TGATCCTGGG CCTGCCGAAT ACCGTCGATG GGGCGATCAC CCTCGTTGCC GAGCACGCCG ACGCCGACAT GCACGCCATG CTTTCGCTGC GTCCGGAGCA CCACGACAGC ATCACGTTGC GCATCGAAAC CCAGCCCGCT GAATTGGCAG ACTCCACGGA AGAAGCCTTC GACGACGACA CCGCCGGCGC CGAGATGCTC ACGCTCGACC TGACGGTGCA GTACGGCGAT GAACTGAAGG CTGCCGCCCG CAAGGCACTG CCGAAAGAGC GCGACATCGA AGCGTGGATT GCCCCCGCAC TGTTTGCCGA TGCGCAGCTC AACGTGCGCT TTGTCGGCGA AGAAGAAGGC CGCACGCTCA ACCGCACCTA CCGCGGCAAG GACTACGCCA CCAACGTGCT GACCTTCTCT TACGCCGAGA GCGCGGAAGA CCCGGTGTCG GCCGACATCG TGCTGTGCTG TGCGGTGGTT GAAAAGGAGG CAAAGGAACA GAAGAAGCCG CTGACCGCGC ACTACGCACA CCTGATCGTG CACGGCGCGC TCCACGCCCA GGGCTACGAC CACGAAGACG CGGCGGATGC AAAGGAAATG GAAGGCATTG AAACGGAGAT CCTCCGCGAC CTCGGTTTTG CCGATCCCTA CGCAGATCGC TAG
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Protein sequence | MAKAKTDTKA KTKKTQLAAA ESLGPRVDVF DAQGKPKTVD ASALRIAFAD GRSLILGLPN TVDGAITLVA EHADADMHAM LSLRPEHHDS ITLRIETQPA ELADSTEEAF DDDTAGAEML TLDLTVQYGD ELKAAARKAL PKERDIEAWI APALFADAQL NVRFVGEEEG RTLNRTYRGK DYATNVLTFS YAESAEDPVS ADIVLCCAVV EKEAKEQKKP LTAHYAHLIV HGALHAQGYD HEDAADAKEM EGIETEILRD LGFADPYADR
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