Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0419 |
Symbol | |
ID | 8018044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 437585 |
End bp | 438514 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644829198 |
Product | CBS domain containing protein |
Protein accession | YP_002980397 |
Protein GI | 241662037 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4535] Putative Mg2+ and Co2+ transporter CorC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGGCC GATGTTTAAC GACGCGCGAC CGCGCCATGA ATGATCCGTA TCCCAGTCCG AAGCCAGCCG ACAAACCCCG CTCACTGCTG GAACGCCTGA CCGACCTTAT CTCGCCCGAG CCCGAATCGC GGGCCGAGCT GCTCGAAATC CTCCAAGACG CCCATGCGCG CAGCCTGATC GACGCCGACT CTCTGTCGAT GATCGAAGGG GTGTTCCAGG TCTCAGACCT GTGTGCGCGC GACATCATGA TCCCGCGCGC GCAGATGGAT GCGCTGAACA TCGCCGACGC GCCGTCAGAA TTCATCCCGT TCGTGCAGGA AGCCGCGCAT TCGCGCTTCC CTGTCTACGA AGGCAGCCGC GACAACATCA TCGGCATCCT GCTCGCGAAG GATCTGCTGC GCTTCTACAC CGACGAAGGC TTCGATGTGC GCGACATGCT GCGCCCGGCC GTGTTCATTC CGGAATCGAA GCGTCTGAAC GTGCTGCTGC GTGACTTCCG CGTCAACCGC AACCATATCG CCATCGTCGT CGATGAATAC GGCGGCGTAG CAGGCCTCAT CACCATTGAA GATGTGCTCG AGCAGATCGT TGGCGACATC GAAGACGAAT ACGACTTCGA TCAGGAAGAA GACAACATCC TGCCGACCGC CGATGGCCAC ATGCGCGTGC GCGGGCTGAC CGAAATCAGC CAGTTCAACG AAGCCTTCGG CACGCATTTC TCCGACGAAG ACGTCGATAC CGTGGGCGGG CTGCTGTCCA ACCACCTGGG CCGCGTGCCG CACCGGGGCG AAAAGATCGT CATGGGCACG CTGCAATTCG ACGTGCTGCG CGCCGATGCG CGCCAGGTGC AGGTGCTGCT CGTGCGCCGC CTCACCACGC CGGCCGGCGG CAATGCCACA GCCGACACCT CTGGTTCTCA CCCCGCCTGA
|
Protein sequence | MLGRCLTTRD RAMNDPYPSP KPADKPRSLL ERLTDLISPE PESRAELLEI LQDAHARSLI DADSLSMIEG VFQVSDLCAR DIMIPRAQMD ALNIADAPSE FIPFVQEAAH SRFPVYEGSR DNIIGILLAK DLLRFYTDEG FDVRDMLRPA VFIPESKRLN VLLRDFRVNR NHIAIVVDEY GGVAGLITIE DVLEQIVGDI EDEYDFDQEE DNILPTADGH MRVRGLTEIS QFNEAFGTHF SDEDVDTVGG LLSNHLGRVP HRGEKIVMGT LQFDVLRADA RQVQVLLVRR LTTPAGGNAT ADTSGSHPA
|
| |