Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0409 |
Symbol | ksgA |
ID | 8018034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 427520 |
End bp | 428365 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644829188 |
Product | dimethyladenosine transferase |
Protein accession | YP_002980387 |
Protein GI | 241662027 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.689254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACGAT CCACGACCGG CGTTCACCAG GGGCACCAGG CCCGCAAGCG CTTTGGCCAG AACTTCCTGG TCGATGACGG CGTGATCCAC GCCATCGTCG CCGCCATTGA TCCGAAGCCC GACGACGTGC TCGTCGAGAT CGGCCCGGGC CTCGGCGCAC TCACCGTCCC GCTGATGGAG CGCGTGCGCA CCCTGCAGGT GGTCGAGCTG GACCGTGATC TTGTCGCACG CTTGCAGAAG CGTTTCGGCG ACCGGCTGGT CGTGCATGCG GGCGATGCGC TGGCGTTCGA TTTCGGCGCG CTGCAGGAGG TGGACCGGCC GCTGCGCATC GTCGGCAACC TGCCGTACAA CATCTCGAGC CCGCTGTTGT TCCATCTGGC CACGTTTGCC GATCGTGTAC GAGACCAGCA TTTCATGCTC CAGAAAGAAG TGGTCGACCG CATGGTCGCC GCGCCGGGCA GCAAGGCCTT CAGCCGGCTG TCGGTGATGC TGCAGGTGCG CTATTACATG GAGCTGGTGC TGGATGTGCC GCCGGGCTCG TTCAACCCGC CGCCCAAGGT GGATTCGGCG GTGGTGCGGA TGATTCCGTG GCCGGCCGAC AAATCGCCGT ATGCGCCCGT CGACATGCGC GCGTTGGGCA CGGTGGTGAC GATGGCGTTT TCGCAGCGGC GAAAGGTGCT GCGCAACACC CTGGGCGCAC TAAGAGACGT GGTTGATTTC GACGCGCTCG GCTTTGACCT GAGCCGCCGC GCAGAAGAGG TGCCGGTGGA AGACTTCGTG GCGGTGGCGA ATGCGCTGCC GGCCAACCGC ATCGCCGGCA GCGTTTCCGA TCTCAGCGAA GATTGA
|
Protein sequence | MARSTTGVHQ GHQARKRFGQ NFLVDDGVIH AIVAAIDPKP DDVLVEIGPG LGALTVPLME RVRTLQVVEL DRDLVARLQK RFGDRLVVHA GDALAFDFGA LQEVDRPLRI VGNLPYNISS PLLFHLATFA DRVRDQHFML QKEVVDRMVA APGSKAFSRL SVMLQVRYYM ELVLDVPPGS FNPPPKVDSA VVRMIPWPAD KSPYAPVDMR ALGTVVTMAF SQRRKVLRNT LGALRDVVDF DALGFDLSRR AEEVPVEDFV AVANALPANR IAGSVSDLSE D
|
| |