Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0408 |
Symbol | pdxA |
ID | 8018033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 426472 |
End bp | 427488 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644829187 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_002980386 |
Protein GI | 241662026 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.817677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAACA TTGCCATCAC CACTGGCGAA CCCGCTGGTA TCGGTCCCGA CATCACGGTG GCCGCGCTGC TGCACCTGGC ACGACAGGCG TCACCGCGTT ACGCCGATGT GCAGTGGCAT GTGATGGGCG ATTCGGCATT GCTGCAGGCG CGCGCGGACG CGATCGGGCA GGGCGATTTC TGGCGCATTG TCTCTACGGC GCTGACTGTC GTGGAGCGCC CGCTGGGTGC ACCCGTGCGC GCCGGCGTGC TTGATGACGC CAACGGCCGC TATGTGCTGG ACCTGCTCGA CGCGGCCATC GACGGCTGCC TGATCGGCAC GGCAGACGGC ATGCGTTACG ACGCGATGGT CACAGCGCCG GTGCAGAAGA GCACGATCAA CGACGCCGGG GTGCCGTTTA CCGGCCACAC CGAGTATCTG GCCGAGCGCA GCCACACGCC GCGCGTGGTC ATGATGCTGG CCGGTCCGCA GCCGGCGCAC GACAACGCCA TGCTGCGCGT GGCGCTGGCG ACGACGCACT TGCCGCTGCG CGACGTGCCG GACGCCATCA CGCCAGCGGT GCTCGATGAG ACGCTCGACA TCGTGCAGCG TGATCTGCGC ACACGCTTCG GTTTGACTGC TCCGCGCATC CTCGTGACGG GGTTGAATCC GCATGCGGGT GAATCCGGCC ACCTCGGCCG CGAAGAGATC GAGGTGATCG AGCCGGCCAT CGCGCGTGCG CGTGCGCGCG GAATCGACGC GCGCGGTCCA TATCCGGCCG ATACGCTGTT CCAGCCGCGC CTGTTGACCG ATGCGGATTG CGTGCTCGCG ATGTACCACG ACCAGGGTTT GGCACCGCTC AAGTACGGCA CCTTCGGCCA TGGCGTGAAT ATCACGCTTG GCCTGCCGTT CGTGCGCACT TCGGTGGATC ACGGTACGGC GCTGGATCTG GCGGGCACGG GCCGCGCCGA GTTCGGCAGC ATGATCGAGG CGATCGATAC CGCCATCGCG ATGGCGCGGC ATACGACGCG CTCCTGA
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Protein sequence | MLNIAITTGE PAGIGPDITV AALLHLARQA SPRYADVQWH VMGDSALLQA RADAIGQGDF WRIVSTALTV VERPLGAPVR AGVLDDANGR YVLDLLDAAI DGCLIGTADG MRYDAMVTAP VQKSTINDAG VPFTGHTEYL AERSHTPRVV MMLAGPQPAH DNAMLRVALA TTHLPLRDVP DAITPAVLDE TLDIVQRDLR TRFGLTAPRI LVTGLNPHAG ESGHLGREEI EVIEPAIARA RARGIDARGP YPADTLFQPR LLTDADCVLA MYHDQGLAPL KYGTFGHGVN ITLGLPFVRT SVDHGTALDL AGTGRAEFGS MIEAIDTAIA MARHTTRS
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