Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0402 |
Symbol | |
ID | 8018027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 419436 |
End bp | 420140 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644829181 |
Product | Nucleotidyl transferase |
Protein accession | YP_002980380 |
Protein GI | 241662020 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.707685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCG CCATGATTTT TGCGGCGGGT CGCGGCGATC GCATGCGGCC GCTGACCGAC CACACGCCCA AGCCACTGCT CACCGTGGGC GGCAAACCGC TGATTGTCTG GCAGATCGAG CGCCTGGCCG CGGCCGGCGT GCGCGACATC GTCATCAACC ACGCGTGGCT CGGCGCGCAG ATCGAAACCG CCCTGGGCGA TGGCAGCGCG TGGGGCGTGC GCCTCGCATA CTCGCCGGAA GGGCAGGCGC TCGAAACGGC AGGCGGGGTT GCGCAGGCCA TGCCGCTACT GCATGCCGGC GATGGGCACA GCGTATTCAT CGCCGTCAGC GGCGATGTGT TCTGCGATTA CGACTACGCG TTGCTGCGCG ACCGGGCGCC CGCAATGGCC GCGCAAGCGG CGCCGGGCAT GCATCTGGTG ATGGTGCCCA ATCCGCCCTA CCACCTGCGC GGCGATTTCG CGCTGGATAA CGAAGGCATG CTCCACACCG AAGGCGCCGA GCGCCTCACG TTCGGCAACA TCGGCTTGTA CGACACCCGC CTGTTTGCCG GCATCGCGCC CGGCACGCGA CTGGCGATGA CGCCGCTGTA CCACCAGGCG ATCGCCGAAG GTCGCGCCAC CGGTGAGCGC TTCGATGGCC GCTGGGAAAA CGTCGGCACG CCCGCCCAAC TGGCCGCACT CGACGCAGAG ATCGCGTCGC GCTAA
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Protein sequence | MTRAMIFAAG RGDRMRPLTD HTPKPLLTVG GKPLIVWQIE RLAAAGVRDI VINHAWLGAQ IETALGDGSA WGVRLAYSPE GQALETAGGV AQAMPLLHAG DGHSVFIAVS GDVFCDYDYA LLRDRAPAMA AQAAPGMHLV MVPNPPYHLR GDFALDNEGM LHTEGAERLT FGNIGLYDTR LFAGIAPGTR LAMTPLYHQA IAEGRATGER FDGRWENVGT PAQLAALDAE IASR
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