Gene Rpic12D_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0369 
Symbol 
ID8017993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp385239 
End bp387077 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content62% 
IMG OID644829148 
ProductABC transporter related 
Protein accessionYP_002980347 
Protein GI241661987 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCT TTCCCGCCTC TTCCGAACCG CCTCCGCCGG GGGCTGCCCG CGGCGACTGG 
CGCACCATCA AGAGCCTGCT GCCGTATCTG CTGGCCTACA AATGGCGCGT GGCGCTGGCG
CTCTCGTTTC TGATCGCAGC CAAGGTGGCA AACCTTGGCG TGCCGATGGT CATGAAACGG
CTGATCGATT CCATGAACGT GTCGCCGTCC GACCCGCGCG CGCTGCTGGT TGTGCCGGTG
GGCATCATCA TCGGCTACGG GCTGCTGCGG CTGTCAACGT CGCTGTTTTC GGAGCTGCGC
GAAATCCTGT TTGCGAAGGT GACCGAGAGT TCTGTGCGCA CGCTCGCACT GCAGGTGTTT
CGCCATCTGC ATGCACTGTC GCTGCGCTTT CACCTTGAGC GCCAAACCGG CGGCATGAGC
CGCGACATCG AGCGCGGCAC ACGCGGCATC CAGTCGCTCA TCTCCTATTC GCTGTACAGC
ATCCTGCCGA CGCTGGTGGA AGTGGGCCTT GTCATCACGT ATTTCTTCGT GAAGTACGAC
GTGTGGTTCG CGCTCATCAC GTTCTGCGCG TTGGTTAGCT ACATCGTATT TACGGTGACG
GTGACGAACT GGCGCACGCA TTTCCGCCGC AAGATGAATG AGCTGGATTC GCGCGCCAAC
CAGAAGGCAA TCGATTCGCT GCTCAATTTC GAGACGGTCA AGTACTTCGG CAACGAAGAC
TACGAAGCAC GTCGCTACGA CGAGAACCTG AAGCACTACC GCGCCGCCGC CATCCGGTCA
CAGAACTCGT TGTCGGTGCT GAACTTCGGC CAGCAGTTCA TCGTCGCCAC GGCGCTCATC
CTGATTCTGT ATCGCGCCAC GCAGGGTGTG GCGGCGGGGC ACATGACGCT GGGCGACCTT
GTGCTCGTCA ACACGCTGAT GCTGCAGATC TACATTCCGC TCAACTTCCT GGGCGTGATC
TACCGTGAGC TGAAGCAGGC GGTGACCGAC ATGGACCGCA TGTTCAATCT GCTGCAGACC
AACCGCGAAG TGGCCGACAA GCCAGACGCC CCGCCGCTGA CGGTGCATGC GGGCGAAGTG
CGCTTCGCGC ATGTCGACTT CAGCTACGAG GCCAATCGCC AGATTCTGTT CGATGTCGAT
TTTACGATTC CGGCCGGCAC GACCACGGCG GTGGTGGGGC AGAGCGGCTC CGGCAAGTCG
ACGCTGGCGC GCCTGCTGTT CCGTTTCTAT GACGTGAAGT CCGGTGCCAT CCAGATCGAC
GGTCAGGATT TGCGCGATGT TACGCAATCC AGCGTGCGCG CCGCCATCGG CATCGTTCCG
CAAGACACGG TGCTCTTCAA CGACACCATC TACTACAACA TCGCCTACGG CCGCCCCGAT
GCCAGCCGTG AAGAGGTGAT CCAAGCCGCC CGCGCGGCGC AGATCCATCA CTTTGTCGAA
TCGCTGCCCG ACGGCTACGA GACGCAAGTC GGCGAGCGCG GCCTGAAGCT CTCCGGCGGC
GAGAAGCAGC GCGTGGCGAT TGCGCGCACC CTGCTCAAGC GGCCACCGAT TCTCGTCTTC
GATGAAGCGA CGTCTGCGCT GGACTCGCGC ACCGAGCACG CCATCCAGGA AGAACTGATG
CGCCTGGCGC AGAACCACAC CACGTTGGTC ATCGCGCACC GCTTGTCGAC CATCGTCCGT
GCGCACCAGA TCCTGGTGAT GGAGCACGGT CGCATCATCG AGCGCGGCAC GCATGAATCG
TTGTTGCGTG CGGAAGGCCG TTACGCGCAG ATGTGGCGCA TGCAGGCGCG CGAGCCGGAG
CGCGTCGCCG AAGAAACAGA AGACGCCCGA GCAGGTTGA
 
Protein sequence
MRRFPASSEP PPPGAARGDW RTIKSLLPYL LAYKWRVALA LSFLIAAKVA NLGVPMVMKR 
LIDSMNVSPS DPRALLVVPV GIIIGYGLLR LSTSLFSELR EILFAKVTES SVRTLALQVF
RHLHALSLRF HLERQTGGMS RDIERGTRGI QSLISYSLYS ILPTLVEVGL VITYFFVKYD
VWFALITFCA LVSYIVFTVT VTNWRTHFRR KMNELDSRAN QKAIDSLLNF ETVKYFGNED
YEARRYDENL KHYRAAAIRS QNSLSVLNFG QQFIVATALI LILYRATQGV AAGHMTLGDL
VLVNTLMLQI YIPLNFLGVI YRELKQAVTD MDRMFNLLQT NREVADKPDA PPLTVHAGEV
RFAHVDFSYE ANRQILFDVD FTIPAGTTTA VVGQSGSGKS TLARLLFRFY DVKSGAIQID
GQDLRDVTQS SVRAAIGIVP QDTVLFNDTI YYNIAYGRPD ASREEVIQAA RAAQIHHFVE
SLPDGYETQV GERGLKLSGG EKQRVAIART LLKRPPILVF DEATSALDSR TEHAIQEELM
RLAQNHTTLV IAHRLSTIVR AHQILVMEHG RIIERGTHES LLRAEGRYAQ MWRMQAREPE
RVAEETEDAR AG