| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0364 |
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| Symbol | |
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| ID | 8017988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 378959 |
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| End bp | 381439 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829143 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_002980342 |
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| Protein GI | 241661982 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.132893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA CTGAACTCCC CACCAGCGCG CAGCCGCAGG CCGGCCAGCG CTCCAACTTC
CTCGTCCGGC GCGTTGCCGT GCTGGGCGCC GGCGTGATGG GTGCGCAGAT TGCCGCGCAC
CTGATCAACG CCAAGGTTCC TGTCACGCTA TTCGACCTGC CCGCCAAGGA AGGCCCCAAG
AGCGGCATCG CGCTCAAGGC CATTGAAAAC CTGAAGAAGC TGTCGCCGGC GCCGCTGGGC
ATCAAAGAGG ACGCCAACCT CATCCAGGCT GCCAACTACG AAGACGACAT CGAGCGCCTG
CGCGATTGCG ATCTCGTCAT CGAAGCGATT GCCGAGCGCA TGGACTGGAA GCACGACCTG
TACAAGAAGG TCGCGCCGCA CATCGCCCCG CATGCGATCT TCGCGTCGAA TACGTCGGGT
CTGTCGATCA CCGAACTGTC GGACGGCTTT GACGCGGAGT TGAAGTCGCG CTTCTGCGGC
GTGCACTTCT TCAATCCGCC GCGCTACATG CACCTGGTCG AGCTGATCCC GACCGCACAC
ACGCGCGGCG ACATCCTCGA CAAGCTGGAA ACGTTCCTGA CCTCCGCACT CGGCAAGGGC
GTGGTGCGTG CGAAGGACAC GCCCAACTTC ATCGCCAACC GCGTCGGCAT CTTCTCGATC
CTGGCGGTGT TTGCAGAATC AGCCAAGTAC GGCATTCCGT TTGACGTGGT GGACGACCTG
ACGGGTTCGA AGCTGGGCCG CGCGAAGTCG GCGACGTTCC GTACGGCCGA CGTGGTGGGC
CTGGACACGA TGGCGCACGT CATCAAGACC ATGCAGGACA ACCTGAAGGA CGATCCGTTC
GCTCCGGTCT ACGCCACGCC GCCCGTGCTG GCCAAGCTGG TGGAAGCAGG CGCCCTGGGC
CAGAAGACCG GCGCCGGTTT CTACAAGAAG GAAGGCAAGG AAATCAAGGT CCTGGATCCG
CAAAGCGGCC AGTACGGCCC GAGCGGCAAG AAGGCGGATG ACATCGTCGT GCGCATCCTG
AAGAAGGAGC CGGCTGAGCG CCTGAAGCTG CTGCGTGAAT CGACCAACCC GCAGGCGCAA
TTCCTGTGGG CGGTGTTCCG CGACGTATTC CATTACATCG CGGTGTACCT GGAGCAGATT
GCGGATTCGG CGGCGGAAGT CGATCTGGCG ATCCGCTGGG GCTTCGGCTG GAACAGCGGC
CCGTTCGAAG ACTGGCAGGA AGCCGGCTGG AAGCAGGTGG CCGAGTGGGT GAAGGAAGAC
ATCGAAGCCG GCAAGGCGCT GTCGAACGCG GCGCTGCCGC AGTGGGTGTT CTCGGGCCCG
GTGGCGGACA ACGGCGGTGT GCATTCGACG CAGGGTTCGT GGTCGGCGCA TCAGGGCACG
TTCCTCTCGC GTAGCACGCT GCCGGTGTAC GGCCGCCAGG TGTTCCGTGC ACCGATCAAG
GGTGCGACGA CGGTCAACCC GCTCACCTAT GGCAAGACCA TCGAAGAGAC CGATGCCGTG
CGCATCTGGG TGGACGACGC GGCCGGTCAG GACGACGTGC TGATCGTCTC GTTCAAGAGC
AAGATGAATA CGATCGGGCC GAGCGTCATC GACGGTCTGA CGCGCGCGGT TGATCTGGCG
GAAGCTGGCT ACAAGGGTCT GGTGGTGTGG CAGCCGACGT CGCTCAGGCT GGGCGCGCCG
GGTGGTCCGT TCTCGGCCGG TGCAAACCTG GAAGAAGCCA TGCCGGCCTT CATGATGGGC
GGCGCCAAGG GCATCGAGCC GTTCGTCAAG AAGTTCCAGG ACGGCATGAT GCGCGTGAAG
TACGCCGGCG TGCCGGTTGT GTCGGCCGCA TCGGGCATCG CACTGGGCGG CGGCTGCGAG
CTGCTGCTGC ACTCGGCCAA GCGTGTGGCT GCCCTGGAAA CGTACATCGG CCTGGTGGAA
GTGGGCGTGG GCCTCGTGCC GGCAGGTGGT GGCCTGAAGG AGGCGGCTCT GGCGGCAGCC
AAGGCTGCGC AGGCAGCCGG CAGCACGAAC ATCCTGCAGT TCCTGACCAA CCGCTTCCAG
GCGGCGGCCA TGGCCAAGGT GTCGTCTTCC GCGCTGGACG CCCAGAAGAT CGGCTACCTG
CAACCGACCG ACACCATCGT CTTCAACGTG CATGAGCTGC TGCACGTTGC ACGCAACGAA
GTGCGTGCGC TGTCCGATTC GGGCTACCGC GCTCCGCTGC GTCCGGTGGG CATTCCGGTG
GCGGGCCGTT CGGGCATCGC CACGATCAAG GCGTCGCTGG TGAACATGCG TGACGGCGGT
TTCATCTCGC AGCACGACTT CACGATCGCC TCGCGCATTG CCGAAGCCGT GTGCGGCGGT
GATGTCGAAG CCGGCGCGCT GGTGGACGAA GAATGGCTGC TGGCGCTGGA GCGCAAGGCC
TTCGTGGATT TGCTCGGCAG CGCCAAGACC CAGGAACGCA TCATGGGCAT GCTGCAGACC
GGCAAGCCGG TGCGCAACTA A
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| Protein sequence | MTRTELPTSA QPQAGQRSNF LVRRVAVLGA GVMGAQIAAH LINAKVPVTL FDLPAKEGPK
SGIALKAIEN LKKLSPAPLG IKEDANLIQA ANYEDDIERL RDCDLVIEAI AERMDWKHDL
YKKVAPHIAP HAIFASNTSG LSITELSDGF DAELKSRFCG VHFFNPPRYM HLVELIPTAH
TRGDILDKLE TFLTSALGKG VVRAKDTPNF IANRVGIFSI LAVFAESAKY GIPFDVVDDL
TGSKLGRAKS ATFRTADVVG LDTMAHVIKT MQDNLKDDPF APVYATPPVL AKLVEAGALG
QKTGAGFYKK EGKEIKVLDP QSGQYGPSGK KADDIVVRIL KKEPAERLKL LRESTNPQAQ
FLWAVFRDVF HYIAVYLEQI ADSAAEVDLA IRWGFGWNSG PFEDWQEAGW KQVAEWVKED
IEAGKALSNA ALPQWVFSGP VADNGGVHST QGSWSAHQGT FLSRSTLPVY GRQVFRAPIK
GATTVNPLTY GKTIEETDAV RIWVDDAAGQ DDVLIVSFKS KMNTIGPSVI DGLTRAVDLA
EAGYKGLVVW QPTSLRLGAP GGPFSAGANL EEAMPAFMMG GAKGIEPFVK KFQDGMMRVK
YAGVPVVSAA SGIALGGGCE LLLHSAKRVA ALETYIGLVE VGVGLVPAGG GLKEAALAAA
KAAQAAGSTN ILQFLTNRFQ AAAMAKVSSS ALDAQKIGYL QPTDTIVFNV HELLHVARNE
VRALSDSGYR APLRPVGIPV AGRSGIATIK ASLVNMRDGG FISQHDFTIA SRIAEAVCGG
DVEAGALVDE EWLLALERKA FVDLLGSAKT QERIMGMLQT GKPVRN
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