| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0343 |
|---|
| Symbol | |
|---|
| ID | 8017967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 353105 |
|---|
| End bp | 353686 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644829122 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002980321 |
|---|
| Protein GI | 241661961 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1238] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.38894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.477555 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAGT GGATCGACAC GCTTTTTGCC ACGCTCGCCC TGCCCAAGGT CGGGCTGCCC
GCCGTCTTCG TCGTCAGTTT CATTTCGGCG ACGCTTTTGC CGCTGGGCTC AGAGCCCGCC
GTGTTTGCTT ACATCAAGCT CAATCCGGAG ATGTTCTGGC CGGCCATCAG TGTCGCCACG
CTCGGCAACA CACTGGGCGG CGTGGTCGAC TGGTGGATGG GCTACGCGGC CAAGCTGGCG
CTGGTGCGCT ACCACCTGGC GCGCCGCCGC CGTCAGCACA GCGCCGAGCA CACCCAGCAT
GTGCCGCACC CCAAACGTCA CCGCGAGCCT CCGCTCGACA AGAAATACTT CCGCTGGATG
CGCCGCATTG GACCGGTGTC ACTGCTCGTG TCGTGGCTGC CGGGCATCGG CGACCCGCTC
TGTACGCTGG CCGGCTGGCT GCGCTTGAAG TTCTGGCCCA GCGTCATGTA CATGGCGATC
GGCAAATTCC TGCGCTATCT GGCGATGACA GCAGCGCTCA TGACCTTGCC CGACGGCTTC
TGGCACGGCA TCCTGGGCTG GATCAAGAGC GTGATGATGT GA
|
|---|
| Protein sequence | MEQWIDTLFA TLALPKVGLP AVFVVSFISA TLLPLGSEPA VFAYIKLNPE MFWPAISVAT
LGNTLGGVVD WWMGYAAKLA LVRYHLARRR RQHSAEHTQH VPHPKRHREP PLDKKYFRWM
RRIGPVSLLV SWLPGIGDPL CTLAGWLRLK FWPSVMYMAI GKFLRYLAMT AALMTLPDGF
WHGILGWIKS VMM
|
|---|
| |