Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0321 |
Symbol | |
ID | 8017945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 331911 |
End bp | 332585 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644829100 |
Product | hypothetical protein |
Protein accession | YP_002980299 |
Protein GI | 241661939 |
COG category | [S] Function unknown |
COG ID | [COG4648] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.828531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCGAC TGACCAGCTT TGCGCGAGGC GCGGCGGGCG TGGGTGCGAT CGTGGCGTAT CAGGTCGGTG CGCATTACGC AGCGGCCACG CCGGGCGCGC ATGGCGTGGG CCTGGCAATG GCGCTGTTAC CGCCGTTGGC AATCGCGCTG GTGGCGGCCA CACGTACCAC GCATCGTGCA TGGCTGTTGC CGCTGTGGTT GCTCGTCTGC TCAGTGCTGT GGAGGGCGCG CGCGCCGCTG GCAGCGCATT TTGACTGGGG CCTGTACCTC GAGCATGCAA GCTTCAACCT GATGATGGCC TACGTGTTCG GCCGCACGCT GGTGGCGGGG CGCGAGCCGC TGTGCACGCA CTTTGCTCAC ATGGTGCACG GCACGCTGAC GCCGCGCATT GCGCGTTACT CGCGGCAAGT CACGCTGGCG TGGACGCTGT TTTTCCTGGT GACCGCCGCC GTATCCACGC TGCTGTTTGC CACGGCACCC ACCGTCACGT GGTCGACGTT TGCGAACTAC CTGTCGCTGC CGCTGGTGGG CGTGATGTTC GTGGCGGAAT ACCTATGCCG CCGCATCGTG CTGCGCGGCG AGCCACACTC CAGCCTGTTC GATGCGGTGC GCGCTTATCG ACAATCGGAG CAATCCAGGC ACGCAACGCC CATCGCCACA GAGCGCCCCC GCTGA
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Protein sequence | MHRLTSFARG AAGVGAIVAY QVGAHYAAAT PGAHGVGLAM ALLPPLAIAL VAATRTTHRA WLLPLWLLVC SVLWRARAPL AAHFDWGLYL EHASFNLMMA YVFGRTLVAG REPLCTHFAH MVHGTLTPRI ARYSRQVTLA WTLFFLVTAA VSTLLFATAP TVTWSTFANY LSLPLVGVMF VAEYLCRRIV LRGEPHSSLF DAVRAYRQSE QSRHATPIAT ERPR
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