| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0319 |
|---|
| Symbol | |
|---|
| ID | 8017943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 329229 |
|---|
| End bp | 330191 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644829098 |
|---|
| Product | lipid A biosynthesis acyltransferase |
|---|
| Protein accession | YP_002980297 |
|---|
| Protein GI | 241661937 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4261] Predicted acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.362183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCT CCGACTGGGC CGAGCGTCCG GAGCGCAGCA ACCTCGCGCT GCTGCGCCTG
ATGACGTGGC TCTCGCTGCG GCTCGGGCGG CCGTTTGGCC GGGTCCTGCT GCGCCTGATT
GCGTTGTATT TCGTGGCAGC CTCGCCAGCG GCGCGGCGTG CTTCGCGTGA GTATCTGCGC
CGCGCGTTCG GCCGCCCTGC AACGCTGCGC GAGGTGTTCC GCCACATGCT CACGTTCGCC
ACGACCATTC ATGACCGCAT CTACCTGATC AGCGGGCGCT TCGGTCTGTT CGACATCCAG
TTGCAGGGCC AACAGCACGT GCACAACGTG CTGGCGCAGG GGCGCGGCGC GTTCCTGCTG
GGCGCGCACC TGGGCAGTTT CGAGGTGGTA CGCGCGCTCG GCCGGACGGT GCCGGATCTA
CGCGTGGCTG TCGCCATGTA CGAAGAGAAC GCGCGAAACA TCAACGCGGC CGTTGCCGCC
ATCAACCCGG CCGCGGCGCC TGAGGTGATT CCGCTGGGCC AGGTAGACGC CATGCTGCGG
GTGCGCGAAG CGCTGGATGA CAACCGGCTC GTCGGCATGC TGGCCGATCG CACGCTGTTG
CGCGATGCGG GGCCGTCAGT CCGGCACATG GATTTTCTCG GCAGCCCGGC GGCGTTTCCG
TTGGGGCCGC TGCACATGGC CGCCATGCTC AAACGCCCCG TGCTGTTCAT GACGGGGCTG
CACCTGGGCG GCAACCGCTA CGCCGTGCAT TTCGATCTGT TGGCGGATTT CGCCGATGTG
CGCCGCGAAG ATCGCGCCGC CGCCGTGCAA GCCGCGCTCG GCCGCTATGT GGAACGCGTT
GAACATTACT GCCGCACCGC ACCGTACAAC TGGTTCAATT ACTTCGACTT CTGGCAGGAT
GCCGACGCGG CCGGGGCGCC GGATCACACC CCCGCCGACC ACCAGACCAC GCAAACGCCA
TGA
|
|---|
| Protein sequence | MKRSDWAERP ERSNLALLRL MTWLSLRLGR PFGRVLLRLI ALYFVAASPA ARRASREYLR
RAFGRPATLR EVFRHMLTFA TTIHDRIYLI SGRFGLFDIQ LQGQQHVHNV LAQGRGAFLL
GAHLGSFEVV RALGRTVPDL RVAVAMYEEN ARNINAAVAA INPAAAPEVI PLGQVDAMLR
VREALDDNRL VGMLADRTLL RDAGPSVRHM DFLGSPAAFP LGPLHMAAML KRPVLFMTGL
HLGGNRYAVH FDLLADFADV RREDRAAAVQ AALGRYVERV EHYCRTAPYN WFNYFDFWQD
ADAAGAPDHT PADHQTTQTP
|
|---|
| |