| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0291 |
|---|
| Symbol | |
|---|
| ID | 8017915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 301896 |
|---|
| End bp | 302684 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644829071 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002980270 |
|---|
| Protein GI | 241661910 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.342823 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCA CCACCCTCGC CCCCAAAACT GCAGCGCCGC AGGCCACGAC TTCCAGTACG
CTGGTCGTCC GCCATCTGAA GAAGCGCTAC GGCACGCGCA CGGTGGTGAA GGACGTGTCG
CTTGACGTGA AGAGCGGTGA AGTGGTCGGT TTGCTGGGCC CCAATGGCGC CGGTAAAACG
ACCTCGTTCT ACATGATCGT CGGCCTGGTG GCGCTGGACG CCGGCGACAT CGTGCTCGAC
GGCGAGCACA TCAGCCGCCT GCCGATCCAC CAGCGTGCAC GCATGGGCCT GTCGTATCTG
CCGCAGGAAG CGTCCGTGTT TCGCAAGCTC AACGTGCAGG AAAACATCCG CGCGGTGCTC
GAGCTGCAGG AGCAGAACGG CAAGAAGCTC TCGCAAGACG AAGTCAATCG CCGCCTCGAC
GGCTTGCTCG ATGATTTGCA GATCGCTCAT CTGCGTGACA ACCCTGCGCT GTCGCTCTCG
GGGGGCGAAC GTCGCCGCGT GGAAATTGCC CGCGCGCTGG CCTCGTCGCC GCGCTTCATC
CTGCTCGATG AACCGTTTGC GGGCGTCGAC CCGATTGCGG TGGGCGAAAT TCAGCGCATC
GTCAGCTTCC TGAAAGACCG CAACATCGGG GTGCTGATCA CCGATCACAA CGTGCGTGAA
ACGCTGGGCA TTTGCGATCA CGCCTACATC ATCAGTGAGG GCACCGTGCT GGCCGCCGGC
ATGCCCGAGC AAATCATCGA AAACGAGGAT GTACGCAAGG TCTATCTGGG CGATAACTTC
CGGATGTAA
|
|---|
| Protein sequence | MSATTLAPKT AAPQATTSST LVVRHLKKRY GTRTVVKDVS LDVKSGEVVG LLGPNGAGKT
TSFYMIVGLV ALDAGDIVLD GEHISRLPIH QRARMGLSYL PQEASVFRKL NVQENIRAVL
ELQEQNGKKL SQDEVNRRLD GLLDDLQIAH LRDNPALSLS GGERRRVEIA RALASSPRFI
LLDEPFAGVD PIAVGEIQRI VSFLKDRNIG VLITDHNVRE TLGICDHAYI ISEGTVLAAG
MPEQIIENED VRKVYLGDNF RM
|
|---|
| |