Gene Rpic12D_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0269 
Symbol 
ID8017892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp279798 
End bp281282 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content64% 
IMG OID644829048 
Productpeptidase M16 domain protein 
Protein accessionYP_002980248 
Protein GI241661888 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.271306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCG TTTCAAACCG GGCTCGGTCG CGAGTCTGGC AATTGGCCGC GACGGCCCTG 
GCGGCGGGCC TGTTGGCCTG CCATGTTGGC GCGCAGGAGC TGGCCGCCGC AGCGGGGCAT
CCGACCGCCG CCGTCACCGG TGGCAAGGTG GGCGCCAGCC AGTCCGACAC GCACGAATAC
AAGCTGCCCA ATGGGCTGCA GTTGATCGTG AAGGAAGACC ACCGCGCCCC TACCGTGGCG
CACATGGTCT GGTATCACGC CGGGAGCATC GACGAGCACA ACGGCACCAC CGGTGTCGCC
CATATGCTCG AACACATGAT GTTCAAGGGC ACCAAGACAG TCGGCCCGGG CGAGTTTTCC
CGCCGCGTGG CAGCCCTGGG CGGCCGCGAA AACGCCATGA CCACGCGTGA CTTCACGATG
TACTTCCAGC AGATCGAGAA ATCGCACCTG GCCGATGTGA TGGGGCTCGA AGCCGATCGC
ATGGCCAATC TCCAGCTCAC CGACAAGGAG TTCAAGCCGG AGATGAATGT GGTGAAGGAA
GAGCGCCGCA TGCGCATCGA CGACTCCGCC CGTTCCACCG TGTATGAGCA GATGCTCGCC
ACGCTGTTCA ACGCCGCGCC GTACCGCAAC CCGACCATCG GCTGGCCGGG AGACCTCGAC
ACGATGACGG TGCAGGACGC CCAGAACTGG TACCACGCCT GGTACACGCC CAACAACGTC
ACCGTGATCG TCGCGGGCGA TGTGAAACCC GACGAAGTCT TCCGCCTCGC GCAGCGCACC
TACGGCAAGC TCAAGCCGCA TGCACTGCCG CGCCGCTATG CGCAGGAGGA GCCCAAGCAG
ATCGGCGTGA AGCGCATCTG GGTGAAGGCG CCGGCCGAGA ATCCGTACGT TGTGCTGGCC
TACAAGGTGC CGCGCCTGAG TGATGTGGAA AAAGACGTCG ACCCGTATGC GTTGGAAGTC
CTGTCGGCCG TGCTCGATGG CTATGACAAC GCGCGCCTGT CGAGCCAGCT CGTCAAAGGC
GAAAAGCGGA TCGCCGACGA CGTCAATGCC GGCTACGACG GCCTGAACCG CGGCCCGTCG
ATCTTCCTGC TGGACGGCTC GCCCGCCGAC GGTCACACCA CCGCCGAGAT CGAACAGGCG
CTGCGCGCGC AGATCGAACG CATCGCCAAG GAAGGCGTGA CCGACGCTGA ACTGAAGCGC
GTGAAGGCGC AGGTTGTGGC CGCGCAGATC TACAAGCGCG ACTCGGTGTT CGGCCAGGGC
ATGGAGATCG GCATGAACGA GATGAGCGGC CTGTCGTGGC GTTCCATCGA TCGCCAGCTC
GAGAAGATCA AGGCCGTGAC GTCGGCGCAG ATCCAGCACG TGGCGCAGAC GTATTTCAAC
GAAGACAACC TCGTCGTCGC CACGCTGCTG CCGCAACCGA TCGATCCCAA CAAACCGGCG
CGCAAGCCTG TTCCAGGTAT GCGCGATGAA GGAGGGCTGC GTTGA
 
Protein sequence
MRIVSNRARS RVWQLAATAL AAGLLACHVG AQELAAAAGH PTAAVTGGKV GASQSDTHEY 
KLPNGLQLIV KEDHRAPTVA HMVWYHAGSI DEHNGTTGVA HMLEHMMFKG TKTVGPGEFS
RRVAALGGRE NAMTTRDFTM YFQQIEKSHL ADVMGLEADR MANLQLTDKE FKPEMNVVKE
ERRMRIDDSA RSTVYEQMLA TLFNAAPYRN PTIGWPGDLD TMTVQDAQNW YHAWYTPNNV
TVIVAGDVKP DEVFRLAQRT YGKLKPHALP RRYAQEEPKQ IGVKRIWVKA PAENPYVVLA
YKVPRLSDVE KDVDPYALEV LSAVLDGYDN ARLSSQLVKG EKRIADDVNA GYDGLNRGPS
IFLLDGSPAD GHTTAEIEQA LRAQIERIAK EGVTDAELKR VKAQVVAAQI YKRDSVFGQG
MEIGMNEMSG LSWRSIDRQL EKIKAVTSAQ IQHVAQTYFN EDNLVVATLL PQPIDPNKPA
RKPVPGMRDE GGLR