Gene Rpic12D_0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0261 
Symbol 
ID8017884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp273159 
End bp273803 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content62% 
IMG OID644829040 
Productmaleylacetoacetate isomerase 
Protein accessionYP_002980240 
Protein GI241661880 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCA AGCTGTACAA CTATTTCCGC AGTTCGGCGT CATTCCGCGT GCGTATTGCC 
TTGGAGGTCA AGGGCCTGCC GTACGACTAC GCGCCGGTCC ACCTGCTCAA GGGCGAGCAA
CTGGCCCCAG ACTTCGTCAA GCTGAACCCC GATGCGCTGG TGCCCGTGCT GTGCGATGGC
AACGACGTGC TGAACCAGTC TTTGGCCATC GTCGAGTATC TGGAAGAGAC GCATCCCGAG
CCCACGCTGC TGCCGGGTTC GGCGAGTAAT CGCGCGCATA TCCGCGCGAT TGCGCTGGCG
ATCGCATGCG AGATCCATCC GCTGAACAAT CCGCGCGTGC TGAAGTATCT GAAGCACACG
TTCAACGTGG AAGAAGAGGC GCGCAACGAG TGGTATCGCC ACTGGGTAAA GCTGGGGTTT
GCAGCGTTGG AGACGCGGCT GTCACAGTCG CCGCTGACCG GCGCCTACTG TGTTGGCGAC
ACGCCGACGC TGGCCGACGT GTGCCTCGTG CCGCAGGTGT TCAACGGCAA GCGGTTCGAT
GTGGCGGTGG AGGATTACCC GACGCTTGCG CGCATCTTTG AGCACTGCAT GGCGCAGGAG
GCGTTTCAGA GGGCTGCGCC TGCGGTGCAG CCGGATGCGG CGTGA
 
Protein sequence
MSIKLYNYFR SSASFRVRIA LEVKGLPYDY APVHLLKGEQ LAPDFVKLNP DALVPVLCDG 
NDVLNQSLAI VEYLEETHPE PTLLPGSASN RAHIRAIALA IACEIHPLNN PRVLKYLKHT
FNVEEEARNE WYRHWVKLGF AALETRLSQS PLTGAYCVGD TPTLADVCLV PQVFNGKRFD
VAVEDYPTLA RIFEHCMAQE AFQRAAPAVQ PDAA