| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0258 |
|---|
| Symbol | |
|---|
| ID | 8017881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 269877 |
|---|
| End bp | 271157 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644829037 |
|---|
| Product | putative nitrate transporter protein |
|---|
| Protein accession | YP_002980237 |
|---|
| Protein GI | 241661877 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.753989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGC CAGACAAGAC CGATGCTCTC GTCAACCCGA TCAACCCGAA GCGCCGCAGC
ATCATGAAAG CCGCGGCGAC GATTGCAGGA GGCAGTGCCG TGGCATTGAT CGATCCGCTG
GTGCGTGCCG GGGCCTGGGC CGCCGGTTCC GATGCGCCCG AGAAGACGGA GTTGAAGGTG
GGTTTCATCC CGCTCACGGA CTGCGCCTCG GTGGTCATGG CGTCCACGCT CGGCCTCGAC
AAGAAGTACG GCATCAAGAT CACGCCGTCG AAAGAAGCCT CGTGGGCCGG CGTACGCGAC
AAGCTCGTGT CGGGCGATCT GGATGCGGCG CACGTGCTGT ACGGCCTGAT CTACGGCGTG
CAACTCGGCA TTGGCGGCCC CAAAAAAGAC ATGGCCGTGC TGATGACGCT CAACAACAAC
GGCCAGGCGA TCACGCTGTC GTCCAAGCTG AAGGAAGCGG GCGTCAAGGA TGGGGCGTCG
TTGAAGGCCG TCATGGCGAA AGACAAGCGC GAATATGTGT TCGCCCAGAC CTTCCCGACC
GGCACGCATG CGATGTGGCT GTACTACTGG CTGGCCGCGC ACGGCATCCA CCCGCTGCAG
GACGCGAAGG CGATCACCGT GCCGCCGCCG CAGATGGTCG CGAACATGCG GGTGGGCAAC
ATGGATGGCT ACTGCGTGGG CGAGCCGTGG GGCGCCCGCG CGATTGCGGA CAACATCGGC
TTTACCGCCG AGACAACACA GGCCATCTGG AAAGACCACC CCGAGAAGGT GCTCGGCACC
ACGGCGGAGT TCGTGCAAAA GTATCCGAAC ACCGCGCGTG CGCTCACGGC CGCGGTGCTG
GAGGCAAGCA AGTTCATTGA TGCATCCGCA TCGAACCGCC GCAAGACGGC CGAGACCATC
GCCGCCAAGT CCTACGTCAA CACCGACATG GACATCATTC TCGATCGCAT GCTCGGCCGC
TACAGCAATG GCCTGGGCAA GACGTGGGAC GACCCGGACC CGATGCGCTT CTATCACGAC
GGCGCGGTCA ACTTCCCGTA CCTGTCGGAC GGCATGTGGT TCCTCACGCA GCACAAGCGC
TGGGGCCTGC TGAAGGCGCA TCCGGATTAC CTGGCCGTCG CCAAGCAGGT CAACCGCATC
GACATCTTCA AGCAGGCGGC AACCGCCACC GGCACGCCGC TGCCCAAGAG CGACATGCGC
ACGGCCAAGC TGATCGACGG CGTGGTGTGG GATGCGAAGA ACCCCGCCGC GTATGCCGAC
GGCTTCAAGC TGAAAGCCTG A
|
|---|
| Protein sequence | MAAPDKTDAL VNPINPKRRS IMKAAATIAG GSAVALIDPL VRAGAWAAGS DAPEKTELKV
GFIPLTDCAS VVMASTLGLD KKYGIKITPS KEASWAGVRD KLVSGDLDAA HVLYGLIYGV
QLGIGGPKKD MAVLMTLNNN GQAITLSSKL KEAGVKDGAS LKAVMAKDKR EYVFAQTFPT
GTHAMWLYYW LAAHGIHPLQ DAKAITVPPP QMVANMRVGN MDGYCVGEPW GARAIADNIG
FTAETTQAIW KDHPEKVLGT TAEFVQKYPN TARALTAAVL EASKFIDASA SNRRKTAETI
AAKSYVNTDM DIILDRMLGR YSNGLGKTWD DPDPMRFYHD GAVNFPYLSD GMWFLTQHKR
WGLLKAHPDY LAVAKQVNRI DIFKQAATAT GTPLPKSDMR TAKLIDGVVW DAKNPAAYAD
GFKLKA
|
|---|
| |