Gene Rpic12D_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0142 
Symbol 
ID8017765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp152301 
End bp153101 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID644828924 
Productshort chain dehydrogenase 
Protein accessionYP_002980124 
Protein GI241661764 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA TCGTCTTCAT CACCGGCGCT TCCAGCGGCA TCGGCCAAGC CTTGGCTCGC 
CAGTACGCAG CGCAGGGCGC AACGATCGGG CTGGTCGCAC GGCGTGTCGA CGCGCTCCAA
GCGTTTGTAC AGACCCTGCC AGCCGCCCTC CAGAGCCGCT GCCACTGCTA CGCCGCCGAC
GTGCGCAGCG CCGATTCAAT GCGCGACGCG GCCAACGCCT TTATCGCCAC GGCCGGGCTG
CCCGATGTGG TGATCGCCAA CGCCGGCATC TCGGTCGGCA CGGACTTGCG CGAACCCGGC
GACCTGAAAG CCTTTGCTGT CGTGATGGAC ACCAACTGGA TGGGCGTGCT CAACACCTTC
CAGCCGTTTG TCGGGCCGAT GCTGGCGCGC GCCAAGCCTG GGCAGCCCGG CGGCACGCTG
GTCGGCATTG CCAGCGTGGC GGGCGTGCGC GGGCTGCCGG GTGCGGCGGC GTACAGCGCC
TCCAAGTCGG CGGTGATCAA GCTGATGGAA AGCCTGCGCG TGGAATTCGG CCCGCTTGGG
CTGCGCGTGG TGACGATCGC CCCCGGCTAC ATCCGCACGC CGATGACCGA ACACAATCCG
TATCCGATGC CCTTCCTGAT GCCGGTGGAC CGCTTCGCGC TGAAAGCCGT GAATGCGATC
CATCGCGGCG TGCGATTCAC GGTGCTGCCA TGGCCGATGG GCATCGTCGC CAAGCTGCTG
CACGTGCTGC CGCGCGGGCT CTATGACTTT GCGTTTGCGC GCGCCGGGCG CAAACCCCGC
AACCCAGAGA TTTCGTCATG A
 
Protein sequence
MSEIVFITGA SSGIGQALAR QYAAQGATIG LVARRVDALQ AFVQTLPAAL QSRCHCYAAD 
VRSADSMRDA ANAFIATAGL PDVVIANAGI SVGTDLREPG DLKAFAVVMD TNWMGVLNTF
QPFVGPMLAR AKPGQPGGTL VGIASVAGVR GLPGAAAYSA SKSAVIKLME SLRVEFGPLG
LRVVTIAPGY IRTPMTEHNP YPMPFLMPVD RFALKAVNAI HRGVRFTVLP WPMGIVAKLL
HVLPRGLYDF AFARAGRKPR NPEISS