Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0142 |
Symbol | |
ID | 8017765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 152301 |
End bp | 153101 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644828924 |
Product | short chain dehydrogenase |
Protein accession | YP_002980124 |
Protein GI | 241661764 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA TCGTCTTCAT CACCGGCGCT TCCAGCGGCA TCGGCCAAGC CTTGGCTCGC CAGTACGCAG CGCAGGGCGC AACGATCGGG CTGGTCGCAC GGCGTGTCGA CGCGCTCCAA GCGTTTGTAC AGACCCTGCC AGCCGCCCTC CAGAGCCGCT GCCACTGCTA CGCCGCCGAC GTGCGCAGCG CCGATTCAAT GCGCGACGCG GCCAACGCCT TTATCGCCAC GGCCGGGCTG CCCGATGTGG TGATCGCCAA CGCCGGCATC TCGGTCGGCA CGGACTTGCG CGAACCCGGC GACCTGAAAG CCTTTGCTGT CGTGATGGAC ACCAACTGGA TGGGCGTGCT CAACACCTTC CAGCCGTTTG TCGGGCCGAT GCTGGCGCGC GCCAAGCCTG GGCAGCCCGG CGGCACGCTG GTCGGCATTG CCAGCGTGGC GGGCGTGCGC GGGCTGCCGG GTGCGGCGGC GTACAGCGCC TCCAAGTCGG CGGTGATCAA GCTGATGGAA AGCCTGCGCG TGGAATTCGG CCCGCTTGGG CTGCGCGTGG TGACGATCGC CCCCGGCTAC ATCCGCACGC CGATGACCGA ACACAATCCG TATCCGATGC CCTTCCTGAT GCCGGTGGAC CGCTTCGCGC TGAAAGCCGT GAATGCGATC CATCGCGGCG TGCGATTCAC GGTGCTGCCA TGGCCGATGG GCATCGTCGC CAAGCTGCTG CACGTGCTGC CGCGCGGGCT CTATGACTTT GCGTTTGCGC GCGCCGGGCG CAAACCCCGC AACCCAGAGA TTTCGTCATG A
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Protein sequence | MSEIVFITGA SSGIGQALAR QYAAQGATIG LVARRVDALQ AFVQTLPAAL QSRCHCYAAD VRSADSMRDA ANAFIATAGL PDVVIANAGI SVGTDLREPG DLKAFAVVMD TNWMGVLNTF QPFVGPMLAR AKPGQPGGTL VGIASVAGVR GLPGAAAYSA SKSAVIKLME SLRVEFGPLG LRVVTIAPGY IRTPMTEHNP YPMPFLMPVD RFALKAVNAI HRGVRFTVLP WPMGIVAKLL HVLPRGLYDF AFARAGRKPR NPEISS
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