Gene Rpic12D_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0134 
Symbol 
ID8017757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp143289 
End bp144470 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content67% 
IMG OID644828916 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_002980116 
Protein GI241661756 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC GCATCGTCAT CGCCTCAGCA GCCCGTACTC CGATGGGCGC CTTCCAGGGC 
GAACTCGCCA GCCTCACTGC CCCGCAACTC GGCGCCGCTG CCATTCGCGC GGCGGTCGAA
CGTGCGGGCC TGAAACCGGA ACAGATCGAA GAAGTCATCA TGGGCTGCGT GCTGCCTGCG
GGCCAGGGGC AGGCGCCGGC GCGTCAGGCC GCACTGGGCG CGGGTCTGCC GCTGTCGGTC
GGCTGCACCA CGGTCAACAA GATGTGCGGT TCGGGCATGC GCGCAGCCAT GAACGCGTAT
GACGCGCTGC TCGCGGGCTC GGTCGACGTG GTGGTCGCGG GCGGCATGGA AAGCATGACG
AATGCGCCGT ACCTGATTCC GAAGGGCCGT GGCGGTTATC GCATCGGGCA CGGCATGATC
TACGACCACA TGATGCTCGA CGGCCTGGAA GACGCCTATG AAAAGGGCCG CGCCATGGGC
ACCTTCGGCG AGGACTGCGC CGAGAAGTAC GGCTTCACGC GCGAAGCCCA GGACCACTTC
GCGATGACGT CCGTGCGCCG CGCGCAGGAG GCCACCGAAT CCGGCGCATT CCGCTGGGAA
ATCACGCCCG TTACCGTGTC GAGCAAAGCG GGCGACACCG TCATCGACAC CGATGAAGGC
CCGCGCCGCA TCAAGGTCGA CAAGATCCCC TCGCTGAAGC CCGCGTTCAA GAAAGACGGC
ACGGTGACGG CCGCGTCTTC TTCGTCGATC AACGATGGGG CGGCTGCGCT GGTGATGATG
CGCGAGTCGA CTGCCAAGCA ACTCGGCATC ACGCCGCTGG CGGTGATGCT GGGCCACACC
ACGCACGCAC AGGCGCCCGG CTGGTTCACC ACGGCGCCGG TCACCGCCAT CGACAAGCTG
TTCAAGAAGC TCGACTGGAA CTCGGGCAAC GTCGACCTGT TCGAGATCAA CGAGGCGTTT
GCCGTGGTGC CGATGGCCGC GATGCACGAC CTGAAGATCC CGCACGAGAA GGTGAACGTG
AACGGCGGCG CGTGCGCGCT GGGTCATCCG ATCGGTGCAT CGGGCGCGCG CCTGATCGCG
ACGCTGCTGG GCGCGCTGCA ACACCGCGGC GGCAAGCGCG GTGTTGCCAG CCTGTGCATT
GGCGGCGGTG AAGCCACGGC CGTCGGCATC GAACTCTACT AA
 
Protein sequence
MSDRIVIASA ARTPMGAFQG ELASLTAPQL GAAAIRAAVE RAGLKPEQIE EVIMGCVLPA 
GQGQAPARQA ALGAGLPLSV GCTTVNKMCG SGMRAAMNAY DALLAGSVDV VVAGGMESMT
NAPYLIPKGR GGYRIGHGMI YDHMMLDGLE DAYEKGRAMG TFGEDCAEKY GFTREAQDHF
AMTSVRRAQE ATESGAFRWE ITPVTVSSKA GDTVIDTDEG PRRIKVDKIP SLKPAFKKDG
TVTAASSSSI NDGAAALVMM RESTAKQLGI TPLAVMLGHT THAQAPGWFT TAPVTAIDKL
FKKLDWNSGN VDLFEINEAF AVVPMAAMHD LKIPHEKVNV NGGACALGHP IGASGARLIA
TLLGALQHRG GKRGVASLCI GGGEATAVGI ELY