Gene Rpic12D_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0120 
Symbol 
ID8017743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp129877 
End bp130377 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content66% 
IMG OID644828902 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_002980102 
Protein GI241661742 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.615211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA CCGATACGAA CGCCCCGCTG CCTGAATCCG CCCAACGCGT GGCCGACCAC 
CTCCGTACGC TCGGCTACGA GAAAGCCATC GTGATGCTGC CGGCCACCGG CAAGACCTCG
GCCGAAGCGG CTGCCGGGCT CGGCTGTTCG GTGGCGGAGA TTGCCAAGTC GATCATCTTC
CGCCGTGCGG AAGACGACGT GCCGGTACTG GTGATCGCCA GCGGTACGAA TCGTGTCGAC
GAGGCAAAGG TTTCAGCGCA CGTGGGCGCG CTGGCCAAGG CCGATGCGAA GTTCGTACGC
GAGAAGACCG GTTACGCCAT CGGCGGCGTG TGTCCGGTCG GCCATGCGGT CAAGCCGGTG
ATGCTGCTCG ACCAAGACCT GTTCCAATAC GACAGCGTGT GGGCCGCGGC CGGCCACCCG
CATGCCGTGT TCAACCTGAC GCCTGCCGAA CTGGAAGCCA TGACCGGCGC GCCTGTGGCC
GACATCGCCC TGCGCGACTG A
 
Protein sequence
MTATDTNAPL PESAQRVADH LRTLGYEKAI VMLPATGKTS AEAAAGLGCS VAEIAKSIIF 
RRAEDDVPVL VIASGTNRVD EAKVSAHVGA LAKADAKFVR EKTGYAIGGV CPVGHAVKPV
MLLDQDLFQY DSVWAAAGHP HAVFNLTPAE LEAMTGAPVA DIALRD