Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0110 |
Symbol | |
ID | 8017733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 117544 |
End bp | 119316 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644828892 |
Product | protein of unknown function DUF1446 |
Protein accession | YP_002980092 |
Protein GI | 241661732 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGG ACACCATTTC CATCGGCGGC GCCAGCGGCT TCTGGGGCGA CAGCATTACG GGGCCGATGC AGCTGGTCGC GTCGGGCCGT CTCGACTTCC TCGTCTTCGA TTACCTGGCC GAGCTGACCA TGTCGCTGCT GGCCAGCGCG CGCATGAAAA ACCCCGAGTC GGGCTATGCC ACCGACTTCG TAAGCGTGGC GATGCGCGCG GTGCTCAAGG ATGCGCTGGC GCAGAACATC CGCATCATCG CCAACGCAGG CGGCGTGAAT CCGCGCGGAT GCGCTGCGGC GCTGCAGGCG TTGGCCGATG AGCTGGGCGT GAGCGTGCGC ATTGCGGTGG TTGAAGGCGA CGACGTCATG CCGCTGCTGC CCACCTTGCG CGACGAAGCT GTACGCGAAT TGCAAAGCGG CCGCCCCTTG CCCGATAAGG TGGTCAGCGC GAATGCGTAT CTCGGCGCAT TGCCGATCAA GGCAGCGCTG GATGCGGGCG CGCAGGTTGT CATCACGGGG CGATGCGTCG ACAGCGCCGT CACGCTCGGC GCGTTGATGC ACCACTTCGG ATGGGCGATC GACGACTACG ATCGACTCGC TGCCGGCAGC CTTGCCGGGC ACATCCTTGA ATGCGGCTGC CAGGGCGCGG GCGGCCTGCA CACCGATTGG GAAGCCGTGC CCGACTGGGC GCACAGCGGC TATCCGATCG CTGAATGCCG GGCCGACGGC AGCTTCATCG TCACCAAGCC CGACGGCACG GGCGGGCTGG TGACCCCCGC GACCGTGGGC GAACAGCTGC TCTATGAAAT TGGCGACCCC GCGCGCTATG TCCTGCCTGA CGTCGTCTGC GACTTCACGC AGGTGACGAT GACGCAGGCC GGCGAGCATC GCGTCGAAGT GCGTGGCGCA CGCGGTCGCG CGCCCACGCC CGATTACAAG GTGAGCGCAA CGTATGCCGA TGGCTATCGC GCGACGGGCC AACTTACCAT CGTCGGTATC GACGCCGATC GGAAGGCGCG CCGCACCGCC GAGGCGATTC TGGAGCGCAC GCGGGGCCTG TTCCGCCAGC TCGGCCTGCC GGACTACAGC GCAACGCATA TCGAGACGCT GGGTTCGGCA TATCTGTTCG GGCCGCATCA GCCCATCGTG CCCCGTTTCG AATCGGTGAT GTGGCTGGCG GTGACGCATC CGAACAAGCA GGCGCTGGAA CTGTTCGCGC GCGAAATCGC CCCGGCTGGC ACGTCGTGGG CGCCCGGCAC GACAGGCGCA GGTGGGCGGC CGAGCGTGGT GCCGGCCATC AAGCAATACG CCTTCCTGAT CGACAAGGCG CGCGTGCAGC CGCGCGTGAC GTTGCTGGGC GAGGAAAGCT TCGACATCGC CGTGCCAACG GGTGGCGCCG CGCTTGAGCC ATCCGCTGCG GTGCAGGCCT CCGTTGCATT GCCTCCCGGC CCGACGCGCG AGGTGCCTCT CATCGAACTC GCCTATGCCC GCAGCGGCGA CAAGGGCGAC ACCTCCAATA TCGGCGTCAT CGCGCGTCGG CCCGAAGACC TGCCGCTGCT GCGCGCGCAA CTGACCGCAG AGGCTGTCGC CGCGTATCTC GCGCACGTCG TGAAGGGGCG TGTGACGCGG TACGACTTGC CCGGCATCCA CGCCCTCAAC TTCGTGTGCG AACAGGCGTT GGGCGGTGGC GGCATGGCGT CGCTGCGAAA CGACCCGCTC GGCAAGGGCA TGGCGCAGTT GCTGCTGACG ATGCCGGTGC GCGTCCCGGT CGACCACCCT TGA
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Protein sequence | MRKDTISIGG ASGFWGDSIT GPMQLVASGR LDFLVFDYLA ELTMSLLASA RMKNPESGYA TDFVSVAMRA VLKDALAQNI RIIANAGGVN PRGCAAALQA LADELGVSVR IAVVEGDDVM PLLPTLRDEA VRELQSGRPL PDKVVSANAY LGALPIKAAL DAGAQVVITG RCVDSAVTLG ALMHHFGWAI DDYDRLAAGS LAGHILECGC QGAGGLHTDW EAVPDWAHSG YPIAECRADG SFIVTKPDGT GGLVTPATVG EQLLYEIGDP ARYVLPDVVC DFTQVTMTQA GEHRVEVRGA RGRAPTPDYK VSATYADGYR ATGQLTIVGI DADRKARRTA EAILERTRGL FRQLGLPDYS ATHIETLGSA YLFGPHQPIV PRFESVMWLA VTHPNKQALE LFAREIAPAG TSWAPGTTGA GGRPSVVPAI KQYAFLIDKA RVQPRVTLLG EESFDIAVPT GGAALEPSAA VQASVALPPG PTREVPLIEL AYARSGDKGD TSNIGVIARR PEDLPLLRAQ LTAEAVAAYL AHVVKGRVTR YDLPGIHALN FVCEQALGGG GMASLRNDPL GKGMAQLLLT MPVRVPVDHP
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