| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0108 |
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| Symbol | |
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| ID | 8017731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 114210 |
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| End bp | 116489 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644828890 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_002980090 |
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| Protein GI | 241661730 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAG CACAGATCGA ACGCAAGCGC ACCGAACATT CGGTGGTGGG TTATCTGACC
GGGGCGATGA GCTTCGCCGT GGTTTCGGCG CCGGCACTGG CCGACACGAA GAAAGACGCC
GTGTCCGCCA CACTGCCCGA GCAGACCGTG ACCGGCACCA ACGGCTTCAA GGCGGATGCG
GCCTCGGGCG GCAAATTCAC CGCGCCGCTG CTCGATACGC CCAAGTCCGT CACGGTGATC
CCCGCTGAGG TATTGCAGGG CACCGGCTCA GTCACGCTCA CCGAGGCCCT GCGCACGGTG
CCGGGCATCG CGTTTGGCGC TGGCGAAGGC GGCAACCCCG TCGGCGATCG TCCGTTCATC
CGCGGCTACG ACGCGCAGGC CAGCACCTTT CTGGACGGGC TGCGCGACAT CGGTGCGCAA
TCGCGCGAGA TGTTCAACGT GGAATCGGTG GAAGTCATCA AGGGTCCGTC GGGTGCGTAT
GAAGGCCGCG GCGCGGCAGG CGGGGCGGTG AACATCGTGA CCAAGACGCC GAAGCTGGAG
CACTTCACCG AGGGCACGCT GTCGGTCGGC AACGCGGCGT ACAAACGCGC CACGGCCGAC
GGCAACTACC AGATCGGCGA GCACGCCGCG TTCCGCCTGA ACGCGATGGC GCACGACGCC
GCCGTTGCGG GCCGTGACGT GACGAGCTTC AGCCGCTGGG GCATCGCACC GTCCATCGCC
TTTGGGCTGG GCACGCCCAC GCGGGCGACG CTGTCGTACT ACCACCTCCA ATCGAACGAC
ACGCCCGACA CCGGCATTCC GTACAACAAC GGCACGTTCA ACCGGCGCAC CGACGGCCGC
CCGCAGCTGT TCGGCCCCGG CGACGGCGCG CCCGTGAATG TCGACCGCAA TGTCTACTAC
GGCCTATCGC GTGATTTCCG CCGCGACCGC GTCGACATGG GCACCTTCAC GCTGGAGCAC
GATGTGTCGA GCGCGCTGAA GCTGCGCAAC ACCACGCGCG TCGCCCGCAC CAGCCAGGAC
ACCGTCTGGA CGCAGCCCGA CGACAGCCAG GGCAACATCT TCTACGGCAT GGTCTGGCGC
CGCGCCAATT CACGCTATTC GGTGGCCAAC ACTGTCGCCA ACCGGACGGA AGCGACCGGC
AAGTTCATCA CCGGCGGCCT CAAGCACAGC TATGCGGCCG GCCTGGAGTT CTCGCGCGAG
CGCAGCCGCA ACGACACCTA CAACGTGGCC ACCGGCAGCA ACCGCTGCCC CAACGGCATC
GGCGCGGCGG GCGGCTACAA CTGCGCGGAT CTGTTCAACC CAAACCCGAA CGACCCATGG
GCCGGCAGCA TCAAGCTCAG CAACAATCCG GCAGAGACGA CGGTGCGCAC GCAATCGGCG
TATGTGTTCG ACACGATCGA ACTGTCGCCG CGGTGGCAAG TCAACGGCGG CCTGCGCTTC
GACCGCTATT CGGCATCGGC CACCACGTCG GCGAATGCGC AAGGCGTGCG TTCGAGCTTC
TCGCGCGATG ACAACCTGCT GAACTACCAG CTGGGCCTCG TGTTCAAGCC TGCGCAGAAC
GGCAGCATTT ATCTGGCGTA CGGCACATCG TCGACGCCGT CGGGCTCGGT GGCGGGCCAG
GGTGCCGATA CCAGCGCGCT CACGCCTGAC CGCTCCGGCA ATCGCGGCGA CGTGCTCGCT
CCGGAAAAGA ACCGCGCCTA CGAACTCGGC ACCAAGTGGA ACGTGCTGGA CAGCAAGCTT
GCGCTGACTG CCGCCATCTT CCGCGTTGAA ACGACGAATG CACGCATCGT GCTGCAGGAC
GGCACCGCTG CCATGGCTGG CAACAAGCGC GTCGACGGCT TCGAGCTGGG TTGGTCGGGC
GCGCTGACCA ACCGCTGGCA GGTGTTCGGG GGCTACACGT ATCTGAAGAG CGAACTGCGC
AACAACGGCG GCGCCGGCGC AGCCTTCGGC GGCACCAACG GAACGGCCTT CCCCAACACG
CCAAAGAACA GCTTCAGCCT GTGGACGACG TATCAGCCGA TGCCGAAGCT CACGCTCGGC
GGCGGCGCGT ATTACGTCTC GAAGGTGTGG GGCAGCGCCA ACCCCGCCAA CCCGAAGTGG
GTGCCGGCCT ACTGGCGCTT TGACGCCATG GCCGCCTACC GCATCGACAA GCACACCACG
TTGCAGCTGA ATGTGCAGAA CGTGTTCGAC AAGGTGTACT TCAACCAGGC GTATGCATCG
CATTACGCAT CACTGGCTCC GGGCCGCACG GCCATCCTGA CGCTGGGCAT TCGCTACTGA
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| Protein sequence | MSAAQIERKR TEHSVVGYLT GAMSFAVVSA PALADTKKDA VSATLPEQTV TGTNGFKADA
ASGGKFTAPL LDTPKSVTVI PAEVLQGTGS VTLTEALRTV PGIAFGAGEG GNPVGDRPFI
RGYDAQASTF LDGLRDIGAQ SREMFNVESV EVIKGPSGAY EGRGAAGGAV NIVTKTPKLE
HFTEGTLSVG NAAYKRATAD GNYQIGEHAA FRLNAMAHDA AVAGRDVTSF SRWGIAPSIA
FGLGTPTRAT LSYYHLQSND TPDTGIPYNN GTFNRRTDGR PQLFGPGDGA PVNVDRNVYY
GLSRDFRRDR VDMGTFTLEH DVSSALKLRN TTRVARTSQD TVWTQPDDSQ GNIFYGMVWR
RANSRYSVAN TVANRTEATG KFITGGLKHS YAAGLEFSRE RSRNDTYNVA TGSNRCPNGI
GAAGGYNCAD LFNPNPNDPW AGSIKLSNNP AETTVRTQSA YVFDTIELSP RWQVNGGLRF
DRYSASATTS ANAQGVRSSF SRDDNLLNYQ LGLVFKPAQN GSIYLAYGTS STPSGSVAGQ
GADTSALTPD RSGNRGDVLA PEKNRAYELG TKWNVLDSKL ALTAAIFRVE TTNARIVLQD
GTAAMAGNKR VDGFELGWSG ALTNRWQVFG GYTYLKSELR NNGGAGAAFG GTNGTAFPNT
PKNSFSLWTT YQPMPKLTLG GGAYYVSKVW GSANPANPKW VPAYWRFDAM AAYRIDKHTT
LQLNVQNVFD KVYFNQAYAS HYASLAPGRT AILTLGIRY
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