Gene Rpic12D_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0097 
Symbol 
ID8017720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp104482 
End bp105339 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID644828879 
Productphenazine biosynthesis protein PhzF family 
Protein accessionYP_002980079 
Protein GI241661719 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID[TIGR00654] phenazine biosynthesis protein PhzF family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.639097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCT ACGCCTTCCG CCTGCTCAAC GTCTTTGCCG AATCCACTTT TGGCGGCAAC 
CAGCTCGCCG TGTTTGAAGA CGGCCGCGGC CTGGACGACG CCACCATGCA GGCCATCGGA
CGCCAGTTCA ACCTGTCCGA AATCACCTTC ATCTTTCCCG ACGAGGCCGA TGGCGCCACG
GCGCGATTCC GCATCTTCAC GCCCGATTAC GAGATGCCAT TTGCCGGCCA CCCGTCGCTG
GGGACCGCGC AGGTGGTGCG CGAGCTGTAT GGCCCCGGTA ACGAGCTGAC GCTGCGTTGC
CAGTCGGGCA TCGTGTCGCT GACGGCGCAG GACGAGGGGT GGTCGCTCGT GCCGCCGCGT
TCGGGCGCGT TGAATACGCG CGAAGCCGAT CCGGGTATTG CCAAGATGCT GGGGCTGGAC
GCCGATGCGC TGGCGGGCCC GCCGCTGTGG ATTGACGCGG GCATCGAGCA ACTGATGGTG
CCGGTCAAGA CGCGCGCCGA TGTGGAGCGT GCCCGGCCCG ACCCCTCAGC CTTCGACGCG
TGGCCGCGCA GCCGCAATGA TGGGCGCAAT GCCTACGTCT TCACCATGCC CGCGCCCGGC
AGCGACGGCC CGGTGGTCTC GCGCTTCTTC TTCGAATACG GTGCCGGCCT CTGGGAAGAC
CCCGGCACCG GCTCGGCGTG CGCCAACCTG GGCGGCTGGC TGCGCGCAAC GGGCCATGCC
TTGCCGGCAA CCTACCGCAT CGAGCAGGGC GCAGCAGTCG GGCGCCCATG CCACCTCACG
CTGCGGGTGG ATGCCGACGG CACGATCCAC GTCGGCGGCC GCGTGATCGA AATCGGCCGC
GGCACGTTGA CGATTTGA
 
Protein sequence
MSRYAFRLLN VFAESTFGGN QLAVFEDGRG LDDATMQAIG RQFNLSEITF IFPDEADGAT 
ARFRIFTPDY EMPFAGHPSL GTAQVVRELY GPGNELTLRC QSGIVSLTAQ DEGWSLVPPR
SGALNTREAD PGIAKMLGLD ADALAGPPLW IDAGIEQLMV PVKTRADVER ARPDPSAFDA
WPRSRNDGRN AYVFTMPAPG SDGPVVSRFF FEYGAGLWED PGTGSACANL GGWLRATGHA
LPATYRIEQG AAVGRPCHLT LRVDADGTIH VGGRVIEIGR GTLTI