| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0095 |
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| Symbol | |
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| ID | 8017718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 99477 |
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| End bp | 102764 |
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| Gene Length | 3288 bp |
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| Protein Length | 1095 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644828877 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_002980077 |
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| Protein GI | 241661717 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.778156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.758233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC TTTCCGCCGC CCGCGCGGCC GATCCCACGC CTGCCAGCGA ACCTGGGCCC
GCGCGCAACA AGGTGCGCTT CGTGACGGCC GCTTCGTTGT TCGATGGGCA TGACGCGTCG
ATCAATATCA TGCGGCGCAT CCTGCAGTCG ATGGGCTGCG AGGTGATCCA CCTCGGGCAC
AACCGCTCGG TGGACGAGGT GGTGAACGCG GCGTTGCAGG AAGACGTGCA GGGCATTGCC
GTGTCCAGCT ACCAGGGTGG CCACGTCGAA TACTTCAAGT ACATGATCGA CGCGCTGCGC
GCACGCGGCG GCGAGCACAT CCAGGTGTTC GGCGGCGGGG GCGGGGTGAT CGTGCCGGCG
GAGATCCGCG AACTGCAGGA CTATGGTGTC GCGCGTATCT ACAGCCCCGA AGACGGCCAG
CGCATGGGCC TGGCCGGCAT GATTGCCGAC ATGGTGCAGC GCTGCGACAT CGATCTTTCC
GTCTATGCGC CCACCACGCT GGAGCCCGTC GCCAACGGCG ACCGCCGCGC CCTGGCGCAA
TTGATCACCG CATTGGAATC GGGCCGGATC GATCCGGCAT TGCGCGACGC CGTACGTGCG
GCTGCGATGG GGGCGCCGAC GCCTGTGCTC GGCATCACGG GCACGGGCGG CGCAGGCAAG
TCGTCGCTGA CCGATGAGCT GATCCGCCGC TTCCGGCTCG ACCAGCAGGA CGCGCTGCGC
ATCGCCGTCA TCTCGATCGA TCCGTCGCGG CGCAAGTCGG GCGGCGCGCT GTTGGGCGAT
CGCATTCGCA TGAACGCGAT CAACCATCCG AACATCTTCG TGCGTTCGCT GGCCACGCGC
GAGGCCAGCC GCGAAATTTC CGACGCGCTG CCTGACGTGA TCGCAGCATG CCGCGCTGGC
GGGTTCGATC TCATCATCGT CGAGACTTCC GGCATCGGGC AGGGCGATGC GGCCATCGTG
CCGCATGTCG ATCTGTCGCT CTACGTGATG ACGCCCGAGT TTGGCGCCGC CAGCCAGCTG
GAGAAGATCG ACATGCTGGA CTTTGCCGAT CTGGTGGCGA TCAACAAGTT CGACCGCAAG
GGCGCGCAGG ATGCGTGGCG TGACGTCGCC AAGCAGGTGC AGCGCAACCG CGAGCAATGG
CATGCCCGCC CCGAAGATAT GCCGGTGTTC GGCACGCAGG CCTCGCACTT CAATGACGAC
GGCGTGACGG CGCTGTATCA CGCGCTGGCC GATCGGCTGA GCGAGCGCGG CATGGCGCTG
GCCGAGCGCA CGCTGCCACG CACGGCCGGC AAATGCTCCA CCAGCCACGA CGCCATCGTG
CCGCCGGCGC GCGTGCGCTA CCTGGCGGAG CTGGCCGATA CCGTGCGCGG CTACCATCGC
CGCGTCGACG CGCAAAGCCG CCTCGCGCGC GAGCGCCAGC AGTTGCGTGC CAGCCACCGC
ATGCTGGAGC AGGCCGGCGC CACCGTGCAG ACGCTGTCCG CGCTCGACAA GCAGGCGGCC
GAGCGCGACG CGCAGCTCGG CGCCGCCGAG CGCAAGCTGC TCGCCATGTG GCCTGACCTG
CGCCGCGCGT ATTCCGGCGA CGAATACGTC GTCAAGATTC GCGACAAGGA AATCCGCACG
CAGCTCACGC ACACCACGCT CTCCGGCACC ACCATCCGCA AGGTCGTACT GCCGCCGTAT
GAAGACGACG GTGAAGTGCT GCGCTGGCTG ATGCGCGAGA ACGTGCCGGG CAGCTTTCCG
TACACCGCCG GCGTGTTCGC CTTCAAGCGC GAGAACGAAG ACCCGACGCG CATGTTCGCA
GGCGAGGGGG ATGCCTTCCG CACCAACCGC CGCTTCAAGC TCGTCTCCGA AGGCATGGAG
GCCAAGCGGC TGTCCACCGC GTTCGACTCC GTCACGCTTT ACGGTGAAGA CCCGGCGCTG
CGCCCCGACA TCTACGGCAA GGTCGGCAAC TCGGGCGTGT CGATCGCCAC GCTCGACGAC
ATGGAAGTGC TCTACGACGG TTTTGACCTG ACCAGCCCCG CCACGTCGGT GTCCATGACG
ATCAACGGCC CGGCACCGAC GATCCTGGCG ATGTTCATGA ACACCGCCAT CGACCAGAAC
CTGGCCAGGT TCCGTTCGGA CAACCGGCGA GAGCCGACGC AGGACGAGGA AGCGAAGATT
CGCGCGTGGG TGCTGCAGAA CGTGCGCGGC ACGGTGCAGG CCGACATCCT CAAGGAAGAC
CAGGGGCAGA ACACCTGCAT CTTTTCAACC GAGTTTTCGC TCAAGGTGAT GGGCGATATC
CAGGAATATT TCGTGCACCA CCAGGTGCGC AATTTCTACT CGGTGTCGAT CTCGGGCTAC
CACATTGCCG AGGCGGGCGC CAACCCGATC TCGCAACTCG CCTTCACGCT GGCCAACGGT
TTCACGTATG TGGAGGCGTA CCTTGCGCGC GGCATGCACA TCGACGATTT CGCGCCCAAC
CTGTCGTTCT TCTTCTCCAA CGGCATGGAC CCGGAGTACA GCGTGCTCGG CCGGGTCGCG
CGTCGCATCT GGGCGGTGAC GCTGCGCGAC AAGTACGGCG CGAATGAGCG CAGCCAGAAG
CTGAAGTACC ACGTGCAGAC CTCGGGCCGA TCCCTGCACG CGCAGGAGAT CACCTTCAAC
GATATCCGCA CGACGCTGCA GGCGCTGATC GCCATCTACG ACAACTGCAA CAGCCTGCAC
ACGAATGCCT ACGACGAGGC CATTACCACC CCGACGGCCG AATCCGTGCG GCGTGCGCTG
GCCATCCAGC TCATCATCAA CCGCGAGTGG GGCCTGGCCA AGTGCGAGAA CCCGAACCAG
GGCAGCTTCG TCATCGACGA ACTGACGGAC CTCGTGGAAG AAGCCGTGCT GCGGGAGTTC
GAGCGCATTG CCGAGCGCGG CGGTGTGTTG GGGGCGATGG AAACCGGCTA CCAGCGCGGC
AAGATCCAGG AAGAGTCGAT GCTGTATGAG CAGCGCAAGC ACGATGGCTC GCTGCCGATC
ATCGGTGTGA ATACGTTTCG CAACCCGGAC GCCGAGAGCG TGGTGCCGCC GCACATCGAA
CTGGCGCGTT CCAGCGAGGA AGAAAAGCAG AGCCAGCTTG CGCGGCTGCA GGATTTTCAT
GCTCGGCATG CCGGGGAAGC CCCGGCCATG CTGCAGCGCC TGCAGCGCGC GGTGATTGAC
GATCAGAACG TGTTTGCGGT GCTGATGGAC GCGGTGCGGG TTTGCTCGCT GGGGCAGATC
ACGCATGCGT TGTTTGAGGT GGGGGGGCAG TATCGGCGGA ATATGTAG
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| Protein sequence | MTDLSAARAA DPTPASEPGP ARNKVRFVTA ASLFDGHDAS INIMRRILQS MGCEVIHLGH
NRSVDEVVNA ALQEDVQGIA VSSYQGGHVE YFKYMIDALR ARGGEHIQVF GGGGGVIVPA
EIRELQDYGV ARIYSPEDGQ RMGLAGMIAD MVQRCDIDLS VYAPTTLEPV ANGDRRALAQ
LITALESGRI DPALRDAVRA AAMGAPTPVL GITGTGGAGK SSLTDELIRR FRLDQQDALR
IAVISIDPSR RKSGGALLGD RIRMNAINHP NIFVRSLATR EASREISDAL PDVIAACRAG
GFDLIIVETS GIGQGDAAIV PHVDLSLYVM TPEFGAASQL EKIDMLDFAD LVAINKFDRK
GAQDAWRDVA KQVQRNREQW HARPEDMPVF GTQASHFNDD GVTALYHALA DRLSERGMAL
AERTLPRTAG KCSTSHDAIV PPARVRYLAE LADTVRGYHR RVDAQSRLAR ERQQLRASHR
MLEQAGATVQ TLSALDKQAA ERDAQLGAAE RKLLAMWPDL RRAYSGDEYV VKIRDKEIRT
QLTHTTLSGT TIRKVVLPPY EDDGEVLRWL MRENVPGSFP YTAGVFAFKR ENEDPTRMFA
GEGDAFRTNR RFKLVSEGME AKRLSTAFDS VTLYGEDPAL RPDIYGKVGN SGVSIATLDD
MEVLYDGFDL TSPATSVSMT INGPAPTILA MFMNTAIDQN LARFRSDNRR EPTQDEEAKI
RAWVLQNVRG TVQADILKED QGQNTCIFST EFSLKVMGDI QEYFVHHQVR NFYSVSISGY
HIAEAGANPI SQLAFTLANG FTYVEAYLAR GMHIDDFAPN LSFFFSNGMD PEYSVLGRVA
RRIWAVTLRD KYGANERSQK LKYHVQTSGR SLHAQEITFN DIRTTLQALI AIYDNCNSLH
TNAYDEAITT PTAESVRRAL AIQLIINREW GLAKCENPNQ GSFVIDELTD LVEEAVLREF
ERIAERGGVL GAMETGYQRG KIQEESMLYE QRKHDGSLPI IGVNTFRNPD AESVVPPHIE
LARSSEEEKQ SQLARLQDFH ARHAGEAPAM LQRLQRAVID DQNVFAVLMD AVRVCSLGQI
THALFEVGGQ YRRNM
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