Gene Rpic12D_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0069 
Symbol 
ID8017692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp75003 
End bp76370 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content67% 
IMG OID644828853 
ProductUDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionYP_002980053 
Protein GI241661693 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.881986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATCG TCATCCTGGC TGCAGGCATG GGCAAACGCA TGCGCTCCGC CCTGCCGAAA 
GTGCTGCACC CCCTGGCCGG CAAACCGCTG CTGGCGCACG TCATTGAAAC CGCCCGCACC
ATGTCGCCGA CGCGGCTGGT GGTCGTGGTG GGCCACGGTG GCGACCGGGT GCGCGAGATG
GTCGGCGCGA CCGACATCGC CTTTGCCACG CAAGACAAGC AGCTTGGCAC GGGCCACGCC
GTCATGCAGG CCGTGGACCA GCTCGACGAG AGCGTGCCCA CCCTCGTGCT CTACGGCGAT
GTGCCGCTCA CCCGCGCCGA AACGCTGAGC GCGCTGGTAA GCGCGGCCGG CAATGACCAC
CTGGGCGTGC TGACCGTGCA CCTGGGCGAC CCGACCGGCT ACGGCCGCAT CGTGCGCGAC
GCCGCCGGCC GCATCACGCG CATCGTCGAG CAGAAAGACG CCAACGAAAC GCAACTGGCC
ATTCACGAAG TGAACACCGG CATCCTGGTG TGTCCGACGG CCAAGCTCAA GAACTGGCTC
GCGACGCTGT CGAATGACAA CGCGCAGGGC GAGTATTACC TGACCGACGT GATCGAGCGT
GCTGCCAGCG AAGGCGTGCC TATTACGTCC GCGCATCCGC TGGCCGAGTG GGAAACGCTG
GGCGTGAACA GCAAGGTGCA ACTGGCGGAG CTGGAGCGCA TTCACCAGCG CAACCTCGCG
CAGCAACTGG TGGAAGACGG CGTGACGTTG ATCGACCCGG CGCGCATCGA CGTGCGCGGC
AAGCTCACCT GCGGCCGCGA CGTGGTGATC GACGTCAACT GCATCTTCGA GGGCGACGTC
ACGCTGGCTG ACGGCGTGCG CATCGGCGCC CATACGGTGA TCCGCGATGC GGTGATCGAG
GCCGGTGCCG AAATTTTGCC GTTCTGCCAT ATCGAGCGCG CCAAGGTTGG CGCCGACTCG
CGCATCGGCC CGTACGCACG TCTGCGCCCG GGCACCGAGT TGGCCCAAGA CGTGCACATC
GGCAACTTTG TCGAGGTCAA GAACAGCCAG ATCGCGGCAC ACAGCAAGGC CAACCACCTG
GCCTACGTGG GCGACGCCAC GGTCGGCTCG CGCGTCAACA TCGGCGCGGG CACCATCACG
TGCAACTACG ACGGGGCGAA CAAATTCCGC ACCGTCATCG AAGACGACGC CTTCATCGGT
TCCGACACGC AACTCGTGGC GCCGGTGCGC GTTGGCAAGG GCGCGACGCT GGGTGCCGGC
ACCACGCTGA CCAAGGATGC GCCGGAGGGC AAGCTGACGG TCTCGCGGGC GCGGCAGGTG
ACCATCGACA GCTGGCAGCG CCCGGTCAAG CAGAAGAAGG AAGGCTGA
 
Protein sequence
MNIVILAAGM GKRMRSALPK VLHPLAGKPL LAHVIETART MSPTRLVVVV GHGGDRVREM 
VGATDIAFAT QDKQLGTGHA VMQAVDQLDE SVPTLVLYGD VPLTRAETLS ALVSAAGNDH
LGVLTVHLGD PTGYGRIVRD AAGRITRIVE QKDANETQLA IHEVNTGILV CPTAKLKNWL
ATLSNDNAQG EYYLTDVIER AASEGVPITS AHPLAEWETL GVNSKVQLAE LERIHQRNLA
QQLVEDGVTL IDPARIDVRG KLTCGRDVVI DVNCIFEGDV TLADGVRIGA HTVIRDAVIE
AGAEILPFCH IERAKVGADS RIGPYARLRP GTELAQDVHI GNFVEVKNSQ IAAHSKANHL
AYVGDATVGS RVNIGAGTIT CNYDGANKFR TVIEDDAFIG SDTQLVAPVR VGKGATLGAG
TTLTKDAPEG KLTVSRARQV TIDSWQRPVK QKKEG