Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0050 |
Symbol | |
ID | 8017673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 54653 |
End bp | 55576 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644828834 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002980034 |
Protein GI | 241661674 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCACT CGCCGCTGCG CTATCTGCAT AGCTTCCTGA CCGTCGCCAA CGAGGGCAGC TTCGTGCGGG CGGCAGACCG CCTCGCCGTG TCGCAACCGG CGTTGTCGTA CCAGATGCGG CAGCTCGAAC AGTGGCTCGG CGTGCCCTTG TTCGAGCGCT CGGGGCGCAA GCTCGTGCTC ACGCGCGCCG GCACGTCGGT GCGGGCGTGG TGCCGTGATG CGTTTGCCGG GTTGGATGAA CTCCGCGCCG CATTGCACAG CGGCGAGATG GAGCGCGTAT CGCTCAAGCT GGCGAGCGGT TCCAGCTTCG GGCGCTATGT GCTGATGCCG GCGCTCCTGA CGCCGTCGCC CGAATCGGAT GCGCCGCTTC TCGACGACGT GCGCCTCGAA CTCGCCTTCG GCAGCGATGA AGAGGTGTTT AGCCATATCG AATCGGGCCG CGCCGATCTC GGCTTTGTCT ACACGCCGCG CACATCGCGC CTGTTTGAAC ACCACGCCGT CTACACAGAA GAATTCGTGC TGGCCTGCAG CGCCCGCGCG TTGCGTGAGC GCACTGCACC GCGCACGCTG GCCGACTGCG CGGCGTTGCC CTTCGTGACC TATGACGAAT CCGATGCGGT TTATGGGCTG TGGTTCAAGG CGCTGTTCCG GCGCATGCCC GAAACCACCG TCAGCGCACA TCACGTATCC GACCTGGAAG AGGTGAGCAC ATTGGTGGAG GCCGACATGG GCTGGTCGGT GCTGCCGCTG CATGCCATTC AGGATGCAGT GGAGCGCGGG CGCCTTGAGG TCGTGCGCCC GATCGTGGCG CGGCGCTGCC TGAACACCGT GTTCGCCGTG CGCCGCACAT CGAGCTTCCC GAGCGAAGCG CAGGACCGCT TGCTGGTGCG GCTTGCGCAG CTTGATGCGG CGGCGCGCGT TTAG
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Protein sequence | MSHSPLRYLH SFLTVANEGS FVRAADRLAV SQPALSYQMR QLEQWLGVPL FERSGRKLVL TRAGTSVRAW CRDAFAGLDE LRAALHSGEM ERVSLKLASG SSFGRYVLMP ALLTPSPESD APLLDDVRLE LAFGSDEEVF SHIESGRADL GFVYTPRTSR LFEHHAVYTE EFVLACSARA LRERTAPRTL ADCAALPFVT YDESDAVYGL WFKALFRRMP ETTVSAHHVS DLEEVSTLVE ADMGWSVLPL HAIQDAVERG RLEVVRPIVA RRCLNTVFAV RRTSSFPSEA QDRLLVRLAQ LDAAARV
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