Gene Rpic12D_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0037 
Symbol 
ID8017660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp41823 
End bp42836 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content66% 
IMG OID644828821 
ProductN-acetyl-gamma-glutamyl-phosphate reductase 
Protein accessionYP_002980021 
Protein GI241661661 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0002] Acetylglutamate semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01851] N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCA AGGTTTTCGT CGACGGTCAG GAAGGCACCA CCGGCCTACG CCTGCTCGAT 
TATCTGTCGC AGCGCGACGA TATCGAGCTC CTGCGCATCG CCGAAGACAA GCGCAAGGAT
TCAGCCGAGC GCGCCAAATT CCTGAATGCC GCCGATGTCG CATTCCTGTG CCTGCCCGAC
GTCGCCTCGC GCGAGGCCGT CTCGCTGGTC AACAACCCGA ACACCTGCAT CATCGACGCC
AGCACCGCGT TCCGCACGTC GGACGACTGG GTCTACGGCC TGCCCGAACT GGCCCAGGGT
CAGCGCGAGC GCCTGCGTAA CACCAAGCGC ATCGCCGTGC CGGGCTGCCA CGCCAGTGCG
TTCGTGCTGC TGATGCGTCC GCTGGTGGAC GCGGGCATCG TCCCGGCCGA CTACCCGGTC
ACCGCGTTCT CGCTCACCGG TTACAGCGGT GGCGGCAAAG CGATGATTGC CGACTACCTC
GCCGCCAATA ATCCGAAGCT CGACAGCCCG CGCCCGTACG CGCTGGCCTT GGCGCACAAG
CACCTGCCGG AGATGCGCGT GCAGAGTCGC CTGAGCCTCG CGCCGATCTT CACGCCGGTC
GTCGGCAATT TCCTCAAGGG CCTGGCCGTG ACGATCGGCC TGCACCCGCA GCACCTGGCC
CGCAAGGTGA GCCCGACGGA CATCGCCCGC GTGCTGGCCG ATTACTACCA GGGCGAGCAG
TTCATCCGCG TGGCGCCGGC TGACAACGTT GCGACGCTCG ACAACGGCTT CTTCGACGTG
CAGGGCGCCA ACGACACCAA TCGTGCCGAC CTGTTCGTGT TCGGTTCGGA CGAGCGCATG
GTCGTCACGG CGCGTCTGGA CAACCTGGGC AAGGGCGCGG CCGGTGCGGC GGTGCAATGC
ATGAACGTGC ATCTGGGTGT GGATGAGGCG ACCAGCCTGC ACGTGGAAGC ACCGATTCCT
GCCGCTGGCG CCGAGCATGC CGTGCGCGAA GCAGCGCCGG GCTTCGCAAG CTGA
 
Protein sequence
MAFKVFVDGQ EGTTGLRLLD YLSQRDDIEL LRIAEDKRKD SAERAKFLNA ADVAFLCLPD 
VASREAVSLV NNPNTCIIDA STAFRTSDDW VYGLPELAQG QRERLRNTKR IAVPGCHASA
FVLLMRPLVD AGIVPADYPV TAFSLTGYSG GGKAMIADYL AANNPKLDSP RPYALALAHK
HLPEMRVQSR LSLAPIFTPV VGNFLKGLAV TIGLHPQHLA RKVSPTDIAR VLADYYQGEQ
FIRVAPADNV ATLDNGFFDV QGANDTNRAD LFVFGSDERM VVTARLDNLG KGAAGAAVQC
MNVHLGVDEA TSLHVEAPIP AAGAEHAVRE AAPGFAS